RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
TP53-219ENST00000610538 LRWD1Q9UFC0 647 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 NFIBO00712 420 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 COBLO75128 1261 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 PTMAP06454 111 aaKnown RBP13.9□□□□□ -0.18
TP53-219ENST00000610538 PLCG1P19174 1290 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 VGLL4Q14135 290 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 TTLL12Q14166 644 aaPredicted RBP13.9□□□□□ -0.18
TP53-219ENST00000610538 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 PDXDC2PQ6P474 469 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
TP53-219ENST00000610538 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 ZNF536O15090 1300 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 SSC5DA1L4H1 1573 aa13.9□□□□□ -0.18
TP53-219ENST00000610538 PEX10O60683 326 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 ZNF76P36508 570 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 FMR1Q06787 632 aaKnown RBP eCLIP13.89□□□□□ -0.19
TP53-219ENST00000610538 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
TP53-219ENST00000610538 GLT8D2Q9H1C3 349 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
TP53-219ENST00000610538 POLR2MP0CAP2 368 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 STAT3P40763 770 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 SARSP49591 514 aaKnown RBP13.89□□□□□ -0.19
TP53-219ENST00000610538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.197e-7■■□□□ 13
TP53-219ENST00000610538 CLMNQ96JQ2 1002 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
TP53-219ENST00000610538 ATAD5Q96QE3 1844 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 MAPK8IP1Q9UQF2 711 aa13.89□□□□□ -0.19
TP53-219ENST00000610538 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
TP53-219ENST00000610538 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
TP53-219ENST00000610538 SH3RF1Q7Z6J0 888 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
TP53-219ENST00000610538 IGSF22Q8N9C0 903 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
TP53-219ENST00000610538 USP11P51784 963 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 USP14P54578 494 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 DPYDQ12882 1025 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 AP3B2Q13367 1082 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 MUM1L1Q5H9M0 696 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
TP53-219ENST00000610538 WDR18Q9BV38 432 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
TP53-219ENST00000610538 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
TP53-219ENST00000610538 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 PLA2G6O60733 806 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 CAVIN2O95810 425 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 ICAM1P05362 532 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 KCNV2Q8TDN2 545 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 CCDC34Q96HJ3 373 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 SLC38A10Q9HBR0 1119 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 CCDC39Q9UFE4 941 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 PPP2R3BQ9Y5P8 575 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 SMC2O95347 1197 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 ECM1Q16610 540 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 DRC7Q8IY82 874 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 SNX29Q8TEQ0 813 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
TP53-219ENST00000610538 VWA5AO00534 786 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 FOSP01100 380 aaPredicted RBP13.86□□□□□ -0.19
TP53-219ENST00000610538 ATP1A3P13637 1013 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 SREBF1P36956 1147 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 STX17P56962 302 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 MORC3Q14149 939 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 PLS1Q14651 629 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 CRYGNQ8WXF5 182 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 AK8Q96MA6 479 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 COL20A1Q9P218 1284 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 SNCAIPQ9Y6H5 919 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
TP53-219ENST00000610538 NCAPHQ15003 741 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 CDK5RAP3Q96JB5 506 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 CSADQ9Y600 493 aa13.86□□□□□ -0.19
TP53-219ENST00000610538 POTECB2RU33 542 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 IRF6O14896 467 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
TP53-219ENST00000610538 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
TP53-219ENST00000610538 GRB10Q13322 594 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 PTPN21Q16825 1174 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
TP53-219ENST00000610538 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
TP53-219ENST00000610538 CLEC4DQ8WXI8 215 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms