RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CTCFL-221ENST00000608903 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-221ENST00000608903 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
CTCFL-221ENST00000608903 ASTN1O14525 1302 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 TM4SF4P48230 202 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 ATP2C1P98194 919 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-221ENST00000608903 GJA10Q969M2 543 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 MBOAT7Q96N66 472 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
CTCFL-221ENST00000608903 PPP6R2O75170 966 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 CYP3A4P08684 503 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 PTPREP23469 700 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 LENG9Q96B70 501 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 CAPNS2Q96L46 248 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
CTCFL-221ENST00000608903 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 LIG1P18858 919 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 CYP3A7P24462 503 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 ME1P48163 572 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 USP11P51784 963 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 GPRC5AQ8NFJ5 357 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 KCNG4Q8TDN1 519 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 MTMR9Q96QG7 549 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 MORC2Q9Y6X9 1032 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 BCRP11274 1271 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 CIITAP33076 1130 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 UBE2HP62256 183 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 USP49Q70CQ1 688 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 HAS1Q92839 578 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 FGD4Q96M96 766 aa13.13□□□□□ -0.31
CTCFL-221ENST00000608903 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
CTCFL-221ENST00000608903 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 SLC25A27O95847 323 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 EIF2AK2P19525 551 aaKnown RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 INHBEP58166 350 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 SOWAHBA6NEL2 793 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 PGK2P07205 417 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 PGM5Q15124 567 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
CTCFL-221ENST00000608903 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
CTCFL-221ENST00000608903 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 NEMFO60524 1076 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 ITGB5P18084 799 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 CRHR2Q13324 411 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
CTCFL-221ENST00000608903 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 KRI1Q8N9T8 703 aaKnown RBP13.11□□□□□ -0.31
CTCFL-221ENST00000608903 FBXO40Q9UH90 709 aa13.11□□□□□ -0.31
CTCFL-221ENST00000608903 CEP131Q9UPN4 1083 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms