RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 RFXAPO00287 272 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 ARIH2O95376 493 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 PFKMP08237 780 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 CHMP4BP1P59074 171 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 SCFD2Q8WU76 684 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 UHRF1Q96T88 793 aaPredicted RBP24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 ZKSCAN3Q9BRR0 538 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 NEDD4P46934 1319 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 CCDC171Q6TFL3 1326 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 WDR19Q8NEZ3 1342 aa24.49■■□□□ 1.51
VIM-AS1-202ENST00000605833 BDP1A6H8Y1 2624 aa24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 SNHG28P0DPA3 235 aa24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 TXNP10599 105 aaKnown RBP24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 TRIP12Q14669 1992 aaPredicted RBP24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 BRDTQ58F21 947 aaPredicted RBP24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 IL27Q8NEV9 243 aa24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 MPHOSPH6Q99547 160 aaKnown RBP24.48■■□□□ 1.51
VIM-AS1-202ENST00000605833 PRRC2BQ5JSZ5 2229 aaKnown RBP24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 MYH6P13533 1939 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 COL4A4P53420 1690 aaPredicted RBP24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 NKRFO15226 690 aaKnown RBP eCLIP24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 COL9A1P20849 921 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 TMEM67Q5HYA8 995 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 NFRKBQ6P4R8 1299 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 MFSD6Q6ZSS7 791 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 UBA5Q9GZZ9 404 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 RAPGEFL1Q9UHV5 662 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 NCOR1O75376 2440 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 KIAA1217Q5T5P2 1943 aa24.47■■□□□ 1.51
VIM-AS1-202ENST00000605833 EPOPA6NHQ4 379 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 A6NJR5 290 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 TRIM6-TRIM34B2RNG4 842 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 ARHGEF15O94989 841 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 ACTN1P12814 892 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 TFF2Q03403 129 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 DNERQ8NFT8 737 aa24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 NECAB3Q96P71 396 aaPredicted RBP24.46■■□□□ 1.51
VIM-AS1-202ENST00000605833 RBAK-RBAKDNI3L0D1 243 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 IQCF3P0C7M6 154 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 RILPL2Q969X0 211 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 TTC14Q96N46 770 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 FTOQ9C0B1 505 aaKnown RBP eCLIP24.45■■□□□ 1.51e-7■■■■■ 35.5
VIM-AS1-202ENST00000605833 PNMA2Q9UL42 364 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 NOD1Q9Y239 953 aa24.45■■□□□ 1.5
VIM-AS1-202ENST00000605833 PITPNM1O00562 1244 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 RFC2P35250 354 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 SKIV2LQ15477 1246 aaKnown RBP24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 KRT40Q6A162 431 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 RETREG2Q8NC44 543 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 TBC1D5Q92609 795 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 SLC9A7Q96T83 725 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 LNPKQ9C0E8 428 aa24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 TSPYL2Q9H2G4 693 aaPredicted RBP24.44■■□□□ 1.5
VIM-AS1-202ENST00000605833 KPNA6O60684 536 aa24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 CDC37Q16543 378 aaPredicted RBP24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 GPATCH4Q5T3I0 446 aaKnown RBP24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 SEPT14Q6ZU15 432 aa24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 AFG1LQ8WV93 481 aa24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 ESR2Q92731 530 aa24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 COL20A1Q9P218 1284 aa24.43■■□□□ 1.5
VIM-AS1-202ENST00000605833 PCP11498 1178 aaKnown RBP24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 KCNQ1P51787 676 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 PTPN11Q06124 597 aaPredicted RBP24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 BFSP2Q13515 415 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 HDAC1Q13547 482 aaPredicted RBP24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 LY6KQ17RY6 165 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 CHST3Q7LGC8 479 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 SPRED2Q7Z698 418 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 HERC6Q8IVU3 1022 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 ARNTL2Q8WYA1 636 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 RNF41Q9H4P4 317 aaPredicted RBP24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 MTCH2Q9Y6C9 303 aa24.42■■□□□ 1.5
VIM-AS1-202ENST00000605833 B4DLN1 442 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 MMP3P08254 477 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 MRPL12P52815 198 aaKnown RBP24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 AAMPQ13685 434 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 PTGISQ16647 500 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 CCDC62Q6P9F0 684 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 PNMA1Q8ND90 353 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 TAAR1Q96RJ0 339 aa24.41■■□□□ 1.5
VIM-AS1-202ENST00000605833 GTPBP6O43824 516 aaPredicted RBP24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 KDM4AO75164 1064 aa24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 TAP1Q03518 808 aa24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 ARHGAP1Q07960 439 aa24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 GDF6Q6KF10 455 aaPredicted RBP24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 TMCO2Q7Z6W1 182 aaPredicted RBP24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 SYTL5Q8TDW5 730 aaPredicted RBP24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 CTAGE1Q96RT6 745 aa24.4■■□□□ 1.5
VIM-AS1-202ENST00000605833 ABCB11O95342 1321 aa24.39■■□□□ 1.5
VIM-AS1-202ENST00000605833 GH1P01241 217 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 BMP1P13497 986 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 SDSP20132 328 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 DGKHQ86XP1 1220 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 ADGRF4Q8IZF3 695 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 RGS22Q8NE09 1264 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 PHOSPHO2Q8TCD6 241 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 KAT14Q9H8E8 782 aa24.39■■□□□ 1.49
VIM-AS1-202ENST00000605833 MYH7BA7E2Y1 1941 aa24.38■■□□□ 1.49
VIM-AS1-202ENST00000605833 ZNF213O14771 459 aa24.38■■□□□ 1.49
VIM-AS1-202ENST00000605833 IRX6P78412 446 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms