RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 ORC3Q9UBD5 711 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ASTN1O14525 1302 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SOWAHBA6NEL2 793 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SMCO2A6NFE2 343 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 K7ELQ4 463 aaPredicted RBP10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PDE4DQ08499 809 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ST3GAL1Q11201 340 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CUL4AQ13619 759 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TRIM29Q14134 588 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CCL14Q16627 93 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CCDC83Q8IWF9 413 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NECAB1Q8N987 351 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 LARP6Q9BRS8 491 aaKnown RBP10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PHF20Q9BVI0 1012 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FLRT1Q9NZU1 646 aa10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SEPT4O43236 478 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 EIF3JO75822 258 aaKnown RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PDIA4P13667 645 aaKnown RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 AKR1A1P14550 325 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TAL1P17542 331 aaPredicted RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CCND2P30279 289 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CACNB2Q08289 660 aaPredicted RBP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PGM5Q15124 567 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 STXBP2Q15833 593 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ARHGEF16Q5VV41 709 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 KCNV1Q6PIU1 500 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SH3TC2Q8TF17 1288 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ABHD8Q96I13 439 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CDHR1Q96JP9 859 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 COL20A1Q9P218 1284 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PCDHA4Q9UN74 947 aa10.86□□□□□ -0.67
SQSTM1P1-201ENST00000603451 RBM47A0AV96 593 aaKnown RBP10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 GJB1P08034 283 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NR3C2P08235 984 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TGFB3P10600 412 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CCL5P13501 91 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PDCP20941 246 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 HOXA13P31271 388 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 CYP2C19P33261 490 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SREBF1P36956 1147 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NLRP5P59047 1200 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ACVR2BQ13705 512 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 VSIG10LQ86VR7 867 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FAM184AQ8NB25 1140 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 INPP4AQ96PE3 977 aaPredicted RBP10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TAAR1Q96RJ0 339 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 KATNBL1Q9H079 304 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FAM184BQ9ULE4 1060 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 Q9Y3F1 56 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 MYH7BA7E2Y1 1941 aa10.85□□□□□ -0.67
SQSTM1P1-201ENST00000603451 MAFGO15525 162 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 SNAI1O95863 264 aaPredicted RBP10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 MMP1P03956 469 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 IQSEC1Q6DN90 963 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 MOXD1Q6UVY6 613 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 BLIDQ8IZY5 108 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 NAP1L4Q99733 375 aaKnown RBP10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 ANO3Q9BYT9 981 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
SQSTM1P1-201ENST00000603451 M0R2N6 131 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 JAK2O60674 1132 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 DUSP11O75319 330 aaKnown RBP10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 CYP3A4P08684 503 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 RARBP10826 455 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 ICAM3P32942 547 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 GJA8P48165 433 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 NKX3-2P78367 333 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 SETQ01105 290 aaPredicted RBP10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 TTLL4Q14679 1199 aa10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 SAFBQ15424 915 aaKnown RBP eCLIP10.83□□□□□ -0.68
SQSTM1P1-201ENST00000603451 NPY5RQ15761 445 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms