RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 USP17L6PQ6QN14 398 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
RNF40-212ENST00000602784 TRPV1Q8NER1 839 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 CCDC148Q8NFR7 591 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 SMARCC2Q8TAQ2 1214 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 WASF1Q92558 559 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.95■□□□□ 0.14
RNF40-212ENST00000602784 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 SEPT4O43236 478 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 ZNF865P0CJ78 1059 aaPredicted RBP15.94■□□□□ 0.14
RNF40-212ENST00000602784 GNA11P29992 359 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
RNF40-212ENST00000602784 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 ACVR2BQ13705 512 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 PRAMEF19Q5SWL8 479 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 ARHGEF16Q5VV41 709 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 MCTP2Q6DN12 878 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 KATNBL1Q9H079 304 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 C6orf50Q9HD87 102 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 VTA1Q9NP79 307 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 ORC3Q9UBD5 711 aaPredicted RBP15.94■□□□□ 0.14
RNF40-212ENST00000602784 KIAA0100Q14667 2235 aaKnown RBP15.94■□□□□ 0.14
RNF40-212ENST00000602784 FRMPD4Q14CM0 1322 aa15.94■□□□□ 0.14
RNF40-212ENST00000602784 CCDC85CA6NKD9 419 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 PPFIA3O75145 1194 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 CD2BP2O95400 341 aaKnown RBP15.93■□□□□ 0.14
RNF40-212ENST00000602784 FOSP01100 380 aaPredicted RBP15.93■□□□□ 0.14
RNF40-212ENST00000602784 NR3C2P08235 984 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 FDPSP14324 419 aaKnown RBP15.93■□□□□ 0.14
RNF40-212ENST00000602784 PDE4DQ08499 809 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 STXBP2Q15833 593 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 XRRA1Q6P2D8 792 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 CCDC83Q8IWF9 413 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 TMX3Q96JJ7 454 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 PDCD2LQ9BRP1 358 aa15.93■□□□□ 0.14
RNF40-212ENST00000602784 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 SGPL1O95470 568 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 MYCP01106 439 aaPredicted RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 XBP1P17861 261 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 EIF2AK2P19525 551 aaKnown RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 GJA8P48165 433 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 CLK2P49760 499 aaKnown RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 LHX8Q68G74 356 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 VSIG10LQ86VR7 867 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 DEFB118Q96PH6 123 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 CRISPLD2Q9H0B8 497 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 VPS54Q9P1Q0 977 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 DDX20Q9UHI6 824 aaKnown RBP15.92■□□□□ 0.14
RNF40-212ENST00000602784 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 MCM3APO60318 1980 aa15.92■□□□□ 0.14
RNF40-212ENST00000602784 RBM47A0AV96 593 aaKnown RBP15.91■□□□□ 0.14
RNF40-212ENST00000602784 SPDYE3A6NKU9 549 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 STAM2O75886 525 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 AKR1A1P14550 325 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 CNGA1P29973 690 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 AP3B2Q13367 1082 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 PGM5Q15124 567 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 UBE2SQ16763 222 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 CCDC144BQ3MJ40 725 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 IQSEC1Q6DN90 963 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 TAPT1Q6NXT6 567 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 U2AF1L4Q8WU68 220 aaKnown RBP15.91■□□□□ 0.14
RNF40-212ENST00000602784 SHISA4Q96DD7 197 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 EHMT1Q9H9B1 1298 aa15.91■□□□□ 0.14
RNF40-212ENST00000602784 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
RNF40-212ENST00000602784 JAK2O60674 1132 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 CCND2P30279 289 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 NLRP5P59047 1200 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 PCNX4Q63HM2 1172 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 REXO1Q8N1G1 1221 aaKnown RBP15.9■□□□□ 0.14
RNF40-212ENST00000602784 DAGLBQ8NCG7 672 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 AIFM3Q96NN9 605 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 PCDHA6Q9UN73 950 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 PCDHA4Q9UN74 947 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 PCDHA8Q9Y5H6 950 aa15.9■□□□□ 0.14
RNF40-212ENST00000602784 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
RNF40-212ENST00000602784 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
RNF40-212ENST00000602784 RARBP10826 455 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 FBXO16Q8IX29 292 aaPredicted RBP15.89■□□□□ 0.13
RNF40-212ENST00000602784 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 SNX21Q969T3 373 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.13
RNF40-212ENST00000602784 LRRC37A2A6NM11 1700 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 POTEFA5A3E0 1075 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
RNF40-212ENST00000602784 TNFAIP2Q03169 654 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 NPY5RQ15761 445 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 KCNV1Q6PIU1 500 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 BLIDQ8IZY5 108 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 ANKLE1Q8NAG6 615 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 IL31RAQ8NI17 732 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 PDGFCQ9NRA1 345 aa15.88■□□□□ 0.13
RNF40-212ENST00000602784 Q9Y3F1 56 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms