RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 STARD7Q9NQZ5 370 aa17.04■□□□□ 0.32
SFXN2-206ENST00000602544 ZMYND8Q9ULU4 1186 aaPredicted RBP17.04■□□□□ 0.32
SFXN2-206ENST00000602544 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
SFXN2-206ENST00000602544 Q9Y3F1 56 aa17.04■□□□□ 0.32
SFXN2-206ENST00000602544 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
SFXN2-206ENST00000602544 NR3C2P08235 984 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 MYCLP12524 364 aaPredicted RBP17.03■□□□□ 0.32
SFXN2-206ENST00000602544 EDNRBP24530 442 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 ACLYP53396 1101 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 RCAN1P53805 252 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 RTP1P59025 263 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 FSCN1Q16658 493 aaKnown RBP17.03■□□□□ 0.32
SFXN2-206ENST00000602544 DUSP28Q4G0W2 176 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
SFXN2-206ENST00000602544 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
SFXN2-206ENST00000602544 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 ASGR1P07306 291 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 CST5P28325 142 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 BEX3Q00994 111 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 PSTPIP2Q9H939 334 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
SFXN2-206ENST00000602544 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-206ENST00000602544 MYADML2A6NDP7 307 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 OPLAHO14841 1288 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 ADCY6O43306 1168 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 SYN1P17600 705 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 CCND2P30279 289 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 ZSWIM6Q9HCJ5 1215 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 PDRG1Q9NUG6 133 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 ZNFX1Q9P2E3 1918 aaKnown RBP17.01■□□□□ 0.31
SFXN2-206ENST00000602544 BRCA2P51587 3418 aa17.01■□□□□ 0.31
SFXN2-206ENST00000602544 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
SFXN2-206ENST00000602544 CABYRO75952 493 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 CPT1AP50416 773 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 GHRHRQ02643 423 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 TRIM60Q495X7 471 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 FBXL16Q8N461 479 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 LBHD1Q9BQE6 289 aaPredicted RBP17■□□□□ 0.31
SFXN2-206ENST00000602544 PDCD2LQ9BRP1 358 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
SFXN2-206ENST00000602544 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
SFXN2-206ENST00000602544 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
SFXN2-206ENST00000602544 ELP1O95163 1332 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
SFXN2-206ENST00000602544 DCDC2CA8MYV0 355 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
SFXN2-206ENST00000602544 ADD1P35611 737 aaKnown RBP16.99■□□□□ 0.31
SFXN2-206ENST00000602544 NAPAP54920 295 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 PGM5Q15124 567 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SFXN2-206ENST00000602544 EHMT1Q9H9B1 1298 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
SFXN2-206ENST00000602544 SPDYE3A6NKU9 549 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 hCG_1984214I3L0E3 225 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 MYL3P08590 195 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 CDC27P30260 824 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 ANAPC15P60006 121 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
SFXN2-206ENST00000602544 C1orf53Q5VUE5 145 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 CCSAPQ6IQ19 270 aaPredicted RBP16.98■□□□□ 0.31
SFXN2-206ENST00000602544 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 USP17L6PQ6QN14 398 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 CXCL17Q6UXB2 119 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 ZNF713Q8N859 430 aaPredicted RBP16.98■□□□□ 0.31
SFXN2-206ENST00000602544 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
SFXN2-206ENST00000602544 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
SFXN2-206ENST00000602544 MROH7Q68CQ1 1323 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 CNTNAP5Q8WYK1 1306 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 PIK3CDO00329 1044 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 CPLX1O14810 134 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 GH1P01241 217 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 PTGS1P23219 599 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 NKX3-2P78367 333 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 CCT2P78371 535 aaKnown RBP16.97■□□□□ 0.31
SFXN2-206ENST00000602544 TLE2Q04725 743 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 GNPTABQ3T906 1256 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 TMEM63BQ5T3F8 832 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
SFXN2-206ENST00000602544 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 GLT8D2Q9H1C3 349 aa16.97■□□□□ 0.31
SFXN2-206ENST00000602544 FAM217BQ9NTX9 383 aaPredicted RBP16.97■□□□□ 0.31
SFXN2-206ENST00000602544 COLQQ9Y215 455 aaPredicted RBP16.97■□□□□ 0.31
SFXN2-206ENST00000602544 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
SFXN2-206ENST00000602544 KPNA6O60684 536 aa16.96■□□□□ 0.31
SFXN2-206ENST00000602544 STAM2O75886 525 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms