RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 GRB10Q13322 594 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 ALX1Q15699 326 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 SPRED2Q7Z698 418 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 MIER1Q8N108 512 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 LMCD1Q9NZU5 365 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 RCAN3Q9UKA8 241 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 PNMA2Q9UL42 364 aa21.61■■□□□ 1.05
IRF3-231ENST00000602190 MYL3P08590 195 aa21.6■■□□□ 1.05
IRF3-231ENST00000602190 SLC16A2P36021 539 aa21.6■■□□□ 1.05
IRF3-231ENST00000602190 PPP2R5BQ15173 497 aa21.6■■□□□ 1.05
IRF3-231ENST00000602190 CCDC62Q6P9F0 684 aa21.6■■□□□ 1.05
IRF3-231ENST00000602190 MAF1Q9H063 256 aa21.6■■□□□ 1.05
IRF3-231ENST00000602190 ISY1Q9ULR0 285 aaKnown RBP21.6■■□□□ 1.05
IRF3-231ENST00000602190 RAD50Q92878 1312 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 RPS6P62753 249 aaKnown RBP21.59■■□□□ 1.05
IRF3-231ENST00000602190 BFSP2Q13515 415 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 CAGE1Q8TC20 777 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 KHSRPQ92945 711 aaKnown RBP eCLIP21.59■■□□□ 1.05
IRF3-231ENST00000602190 HLA-CQ95604 372 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 CHMP4CQ96CF2 233 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 CERS4Q9HA82 394 aa21.59■■□□□ 1.05
IRF3-231ENST00000602190 GPR37L1O60883 481 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 ARIH2O95376 493 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 CXCL10P02778 98 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 PDHBP11177 359 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 TOP1P11387 765 aaKnown RBP21.58■■□□□ 1.05
IRF3-231ENST00000602190 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.05
IRF3-231ENST00000602190 VPS53Q5VIR6 699 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 RNF207Q6ZRF8 634 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 OTUD7AQ8TE49 926 aaPredicted RBP21.58■■□□□ 1.05
IRF3-231ENST00000602190 AFAP1L1Q8TED9 768 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 ARNTL2Q8WYA1 636 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 COPS5Q92905 334 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 TMEM47Q9BQJ4 181 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 FSD1Q9BTV5 496 aa21.58■■□□□ 1.05
IRF3-231ENST00000602190 GPHNQ9NQX3 736 aaPredicted RBP21.58■■□□□ 1.05
IRF3-231ENST00000602190 ZMYM6O95789 1325 aa21.57■■□□□ 1.04
IRF3-231ENST00000602190 PTPDC1A2A3K4 754 aa21.57■■□□□ 1.04
IRF3-231ENST00000602190 KIF28PB7ZC32 967 aa21.57■■□□□ 1.04
IRF3-231ENST00000602190 WDR5P61964 334 aaKnown RBP21.57■■□□□ 1.04
IRF3-231ENST00000602190 SKIV2LQ15477 1246 aaKnown RBP21.57■■□□□ 1.04
IRF3-231ENST00000602190 CCDC96Q2M329 555 aa21.57■■□□□ 1.04
IRF3-231ENST00000602190 RETREG2Q8NC44 543 aa21.57■■□□□ 1.04
IRF3-231ENST00000602190 DHX38Q92620 1227 aaKnown RBP21.57■■□□□ 1.04
IRF3-231ENST00000602190 MUC6Q6W4X9 2439 aa21.56■■□□□ 1.04
IRF3-231ENST00000602190 LCHNA4D1U4 455 aa21.56■■□□□ 1.04
IRF3-231ENST00000602190 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
IRF3-231ENST00000602190 ZNF543Q08ER8 600 aa21.56■■□□□ 1.04
IRF3-231ENST00000602190 PPP1R13LQ8WUF5 828 aa21.56■■□□□ 1.04
IRF3-231ENST00000602190 KAT2BQ92831 832 aa21.56■■□□□ 1.04
IRF3-231ENST00000602190 PARNO95453 639 aaKnown RBP21.55■■□□□ 1.04
IRF3-231ENST00000602190 PDE4DQ08499 809 aa21.55■■□□□ 1.04
IRF3-231ENST00000602190 MKRN4PQ13434 485 aaPredicted RBP21.55■■□□□ 1.04
IRF3-231ENST00000602190 FAM47CQ5HY64 1035 aa21.55■■□□□ 1.04
IRF3-231ENST00000602190 TMEM31Q5JXX7 168 aa21.55■■□□□ 1.04
IRF3-231ENST00000602190 TRAF7Q6Q0C0 670 aa21.55■■□□□ 1.04
IRF3-231ENST00000602190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.54■■□□□ 1.04
IRF3-231ENST00000602190 PI4K2BG5E9Z4 385 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 MMP3P08254 477 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 TXNP10599 105 aaKnown RBP21.54■■□□□ 1.04
IRF3-231ENST00000602190 CALML3P27482 149 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 ERVK-21P61565 698 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 ARHGAP1Q07960 439 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 PTGISQ16647 500 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 TCTN1Q2MV58 587 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 GDF6Q6KF10 455 aaPredicted RBP21.54■■□□□ 1.04
IRF3-231ENST00000602190 TTC14Q96N46 770 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 CD320Q9NPF0 282 aa21.54■■□□□ 1.04
IRF3-231ENST00000602190 FRMPD2Q68DX3 1309 aaPredicted RBP21.54■■□□□ 1.04
IRF3-231ENST00000602190 COL4A6Q14031 1691 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 MICAL3Q7RTP6 2002 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 NBNO60934 754 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 GJB5O95377 273 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 SELPP16109 830 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 MX1P20591 662 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 CNKSR3Q6P9H4 555 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 TICAM2Q86XR7 235 aa21.53■■□□□ 1.04
IRF3-231ENST00000602190 MPHOSPH6Q99547 160 aaKnown RBP21.53■■□□□ 1.04
IRF3-231ENST00000602190 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
IRF3-231ENST00000602190 LAMA4Q16363 1823 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 FGAP02671 866 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 DEFB103AP81534 67 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 TRIM71Q2Q1W2 868 aaKnown RBP21.52■■□□□ 1.04
IRF3-231ENST00000602190 LRRC8DQ7L1W4 858 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 CCDC155Q8N6L0 562 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
IRF3-231ENST00000602190 SUGCTQ9HAC7 445 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 GPCPD1Q9NPB8 672 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 HELLSQ9NRZ9 838 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 GTF2IRD1Q9UHL9 959 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 MTMR7Q9Y216 660 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 HCN4Q9Y3Q4 1203 aa21.52■■□□□ 1.04
IRF3-231ENST00000602190 ABHD14A-ACY1A0A1B0GW23 586 aa21.51■■□□□ 1.03
IRF3-231ENST00000602190 HAS3O00219 553 aa21.51■■□□□ 1.03
IRF3-231ENST00000602190 HOXD8P13378 290 aaPredicted RBP21.51■■□□□ 1.03
IRF3-231ENST00000602190 KCNJ6P48051 423 aa21.51■■□□□ 1.03
IRF3-231ENST00000602190 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
IRF3-231ENST00000602190 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms