RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TNFRSF10AO00220 468 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
IRF3-225ENST00000600022 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 KRT40Q6A162 431 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 SPRED2Q7Z698 418 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
IRF3-225ENST00000600022 UBA5Q9GZZ9 404 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
IRF3-225ENST00000600022 EPOPA6NHQ4 379 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 TFF2Q03403 129 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 FAM47CQ5HY64 1035 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
IRF3-225ENST00000600022 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
IRF3-225ENST00000600022 SCN5AQ14524 2016 aa16.05■□□□□ 0.16
IRF3-225ENST00000600022 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
IRF3-225ENST00000600022 EDNRBP24530 442 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 USH1GQ495M9 461 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 MTG1Q9BT17 334 aaPredicted RBP16.04■□□□□ 0.16
IRF3-225ENST00000600022 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 THEGQ9P2T0 379 aa16.04■□□□□ 0.16
IRF3-225ENST00000600022 NEDD4P46934 1319 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 A6NJR5 290 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 CA3P07451 260 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 PDE4DQ08499 809 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 GPNMBQ14956 572 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
IRF3-225ENST00000600022 TICAM2Q86XR7 235 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 CTAGE1Q96RT6 745 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 MTIF3Q9H2K0 278 aaKnown RBP16.03■□□□□ 0.16
IRF3-225ENST00000600022 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
IRF3-225ENST00000600022 IQCF3P0C7M6 154 aa16.02■□□□□ 0.16
IRF3-225ENST00000600022 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
IRF3-225ENST00000600022 CPT1AP50416 773 aa16.02■□□□□ 0.16
IRF3-225ENST00000600022 MRPS5P82675 430 aaKnown RBP16.02■□□□□ 0.16
IRF3-225ENST00000600022 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
IRF3-225ENST00000600022 RILPL2Q969X0 211 aa16.02■□□□□ 0.16
IRF3-225ENST00000600022 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
IRF3-225ENST00000600022 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
IRF3-225ENST00000600022 PRRC2BQ5JSZ5 2229 aaKnown RBP16.01■□□□□ 0.15
IRF3-225ENST00000600022 SUPT20HL2P0C7V6 817 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 COL9A1P20849 921 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 TCTN1Q2MV58 587 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 AFG1LQ8WV93 481 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 TTC14Q96N46 770 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
IRF3-225ENST00000600022 NCOR1O75376 2440 aa16■□□□□ 0.15
IRF3-225ENST00000600022 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
IRF3-225ENST00000600022 BMP1P13497 986 aa16■□□□□ 0.15
IRF3-225ENST00000600022 CHMLP26374 656 aa16■□□□□ 0.15
IRF3-225ENST00000600022 KCNQ1P51787 676 aa16■□□□□ 0.15
IRF3-225ENST00000600022 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
IRF3-225ENST00000600022 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
IRF3-225ENST00000600022 CHST3Q7LGC8 479 aa16■□□□□ 0.15
IRF3-225ENST00000600022 KAT2BQ92831 832 aa16■□□□□ 0.15
IRF3-225ENST00000600022 UHRF1Q96T88 793 aaPredicted RBP16■□□□□ 0.15
IRF3-225ENST00000600022 MTCH2Q9Y6C9 303 aa16■□□□□ 0.15
IRF3-225ENST00000600022 TCF20Q9UGU0 1960 aaKnown RBP16■□□□□ 0.15
IRF3-225ENST00000600022 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
IRF3-225ENST00000600022 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 HIP1O00291 1037 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
IRF3-225ENST00000600022 TAP1Q03518 808 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 ARHGAP1Q07960 439 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
IRF3-225ENST00000600022 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
IRF3-225ENST00000600022 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 ADGRF4Q8IZF3 695 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 DNERQ8NFT8 737 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 SYTL5Q8TDW5 730 aaPredicted RBP15.99■□□□□ 0.15
IRF3-225ENST00000600022 DHX38Q92620 1227 aaKnown RBP15.99■□□□□ 0.15
IRF3-225ENST00000600022 FTOQ9C0B1 505 aaKnown RBP eCLIP15.99■□□□□ 0.15
IRF3-225ENST00000600022 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
IRF3-225ENST00000600022 RAD50Q92878 1312 aa15.98■□□□□ 0.15
IRF3-225ENST00000600022 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
IRF3-225ENST00000600022 KDM4AO75164 1064 aa15.98■□□□□ 0.15
IRF3-225ENST00000600022 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
IRF3-225ENST00000600022 ARNTL2Q8WYA1 636 aa15.98■□□□□ 0.15
IRF3-225ENST00000600022 ZMYM6O95789 1325 aa15.97■□□□□ 0.15
IRF3-225ENST00000600022 B4E1Z4 1266 aa15.97■□□□□ 0.15
IRF3-225ENST00000600022 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
IRF3-225ENST00000600022 SORBS3O60504 671 aa15.97■□□□□ 0.15
IRF3-225ENST00000600022 REC8O95072 547 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms