RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
SIN3B-210ENST00000599880 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
SIN3B-210ENST00000599880 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
SIN3B-210ENST00000599880 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
SIN3B-210ENST00000599880 COL20A1Q9P218 1284 aa12.68□□□□□ -0.38
SIN3B-210ENST00000599880 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
SIN3B-210ENST00000599880 PRC1O43663 620 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 CYTH3O43739 400 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
SIN3B-210ENST00000599880 CDC45O75419 566 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 CD4P01730 458 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 ITGB8P26012 769 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 KIF5BP33176 963 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 LIFRP42702 1097 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 SLC35G1Q2M3R5 365 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
SIN3B-210ENST00000599880 TMEM63BQ5T3F8 832 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 TBC1D5Q92609 795 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 TAAR1Q96RJ0 339 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 SPZ1Q9BXG8 430 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
SIN3B-210ENST00000599880 TANC1Q9C0D5 1861 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 A6NJR5 290 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
SIN3B-210ENST00000599880 CFBP00751 764 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 TIMP1P01033 207 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 PTGS1P23219 599 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 PURAQ00577 322 aaKnown RBP12.66□□□□□ -0.38
SIN3B-210ENST00000599880 FPGSQ05932 587 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 STXBP2Q15833 593 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
SIN3B-210ENST00000599880 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 PIGSQ96S52 555 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 PXMP2Q9NR77 195 aa12.66□□□□□ -0.38
SIN3B-210ENST00000599880 KPNA6O60684 536 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
SIN3B-210ENST00000599880 CALM1P0DP23 149 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 CALM2P0DP24 149 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 CALM3P0DP25 149 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
SIN3B-210ENST00000599880 GNAQP50148 359 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 TSGA10IPQ3SY00 556 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
SIN3B-210ENST00000599880 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 CCDC69A6NI79 296 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 ARIH2O95376 493 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 NR3C2P08235 984 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
SIN3B-210ENST00000599880 SHHQ15465 462 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-210ENST00000599880 PDCD2LQ9BRP1 358 aa12.64□□□□□ -0.39
SIN3B-210ENST00000599880 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-210ENST00000599880 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-210ENST00000599880 FRMPD4Q14CM0 1322 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 GCOM1H8Y6P7 765 aaPredicted RBP12.63□□□□□ -0.39
SIN3B-210ENST00000599880 GH1P01241 217 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 POLR2MP0CAP2 368 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.392e-17■■■□□ 15.8
SIN3B-210ENST00000599880 PGM5Q15124 567 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
SIN3B-210ENST00000599880 RRP36Q96EU6 259 aaKnown RBP12.63□□□□□ -0.39
SIN3B-210ENST00000599880 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
SIN3B-210ENST00000599880 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 COL6A3P12111 3177 aa12.63□□□□□ -0.39
SIN3B-210ENST00000599880 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 B4GALT4O60513 344 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 MYL3P08590 195 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 EPHB4P54760 987 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 PSMC6P62333 389 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 SMAD3P84022 425 aaKnown RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-210ENST00000599880 KRT32Q14532 448 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 VSIG10LQ86VR7 867 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
SIN3B-210ENST00000599880 COPS5Q92905 334 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms