RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ARVCFO00192 962 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 TXNP10599 105 aaKnown RBP16.61■□□□□ 0.25
IRF3-224ENST00000599680 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 STXBP2Q15833 593 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
IRF3-224ENST00000599680 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 MAP3K14Q99558 947 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
IRF3-224ENST00000599680 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 KIAA0355O15063 1070 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 PPP1R11O60927 126 aaPredicted RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 CALM1P0DP23 149 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 CALM2P0DP24 149 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 CALM3P0DP25 149 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 PTGS1P23219 599 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 FAAP100Q0VG06 881 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 LZTS2Q9BRK4 669 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 COL20A1Q9P218 1284 aa16.6■□□□□ 0.25
IRF3-224ENST00000599680 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
IRF3-224ENST00000599680 MYL3P08590 195 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 LIFRP42702 1097 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 GNAQP50148 359 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 CDK7P50613 346 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 HSD17B4P51659 736 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 ITGA7Q13683 1181 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 LRCH3Q96II8 777 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 SEZ6LQ9BYH1 1024 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 SLC12A7Q9Y666 1083 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
IRF3-224ENST00000599680 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.25
IRF3-224ENST00000599680 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.24
IRF3-224ENST00000599680 CYTH3O43739 400 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 POLR2MP0CAP2 368 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.24
IRF3-224ENST00000599680 FPGSQ05932 587 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 KRT32Q14532 448 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 SPZ1Q9BXG8 430 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 LRRC2Q9BYS8 371 aa16.58■□□□□ 0.24
IRF3-224ENST00000599680 OPLAHO14841 1288 aa16.57■□□□□ 0.24
IRF3-224ENST00000599680 NR3C2P08235 984 aa16.57■□□□□ 0.24
IRF3-224ENST00000599680 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
IRF3-224ENST00000599680 PSMC6P62333 389 aa16.57■□□□□ 0.24
IRF3-224ENST00000599680 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
IRF3-224ENST00000599680 FAM126BQ8IXS8 530 aa16.57■□□□□ 0.24
IRF3-224ENST00000599680 KPNA6O60684 536 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 EIF3JO75822 258 aaKnown RBP16.56■□□□□ 0.24
IRF3-224ENST00000599680 TIMP1P01033 207 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 GH1P01241 217 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 RXRAP19793 462 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 SMARCA1P28370 1054 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 FGD1P98174 961 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 GHRHRQ02643 423 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 FCHSD1Q86WN1 690 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 COPS5Q92905 334 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 CUL5Q93034 780 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
IRF3-224ENST00000599680 PPP1R12CQ9BZL4 782 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 TBX21Q9UL17 535 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
IRF3-224ENST00000599680 ARIH2O95376 493 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 ITGB8P26012 769 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 CCND2P30279 289 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 PURAQ00577 322 aaKnown RBP16.55■□□□□ 0.24
IRF3-224ENST00000599680 SHHQ15465 462 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 LY6KQ17RY6 165 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 FAM47CQ5HY64 1035 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 TMEM199Q8N511 208 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 SLC43A3Q8NBI5 491 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
IRF3-224ENST00000599680 A6NJR5 290 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 HMGB1P09429 215 aaKnown RBP16.54■□□□□ 0.24
IRF3-224ENST00000599680 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.243e-14■■■■■ 55.3
IRF3-224ENST00000599680 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
IRF3-224ENST00000599680 PGM5Q15124 567 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 MFSD5Q6N075 450 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
IRF3-224ENST00000599680 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 SMARCC2Q8TAQ2 1214 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms