RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 ABCB11O95342 1321 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
EBI3-202ENST00000599339 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.32
EBI3-202ENST00000599339 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
EBI3-202ENST00000599339 MCF2L2Q86YR7 1114 aa17.08■□□□□ 0.32
EBI3-202ENST00000599339 CNNM2Q9H8M5 875 aa17.08■□□□□ 0.32
EBI3-202ENST00000599339 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.32
EBI3-202ENST00000599339 A6NJR5 290 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 ZBBXA8MT70 800 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 B4E1Z4 1266 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
EBI3-202ENST00000599339 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
EBI3-202ENST00000599339 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
EBI3-202ENST00000599339 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
EBI3-202ENST00000599339 UBAC1Q9BSL1 405 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 CPVLQ9H3G5 476 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 PRDM12Q9H4Q4 367 aa17.07■□□□□ 0.32
EBI3-202ENST00000599339 IGHDP01880 384 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 CYP2C9P11712 490 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 ACTN1P12814 892 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 ENAHQ8N8S7 591 aaPredicted RBP17.06■□□□□ 0.32
EBI3-202ENST00000599339 RETREG2Q8NC44 543 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 SCLYQ96I15 445 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 NKX2-4Q9H2Z4 354 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 MRPL11Q9Y3B7 192 aaKnown RBP17.06■□□□□ 0.32
EBI3-202ENST00000599339 MYO9BQ13459 2157 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 SCN10AQ9Y5Y9 1956 aa17.06■□□□□ 0.32
EBI3-202ENST00000599339 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 RFC2P35250 354 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 BFSP2Q13515 415 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 STXBP2Q15833 593 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 SYTL5Q8TDW5 730 aaPredicted RBP17.05■□□□□ 0.32
EBI3-202ENST00000599339 COPS5Q92905 334 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 IWS1Q96ST2 819 aa17.05■□□□□ 0.32
EBI3-202ENST00000599339 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 GH1P01241 217 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
EBI3-202ENST00000599339 QRICH1Q2TAL8 776 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
EBI3-202ENST00000599339 CCDC155Q8N6L0 562 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 PRUNE2Q8WUY3 3088 aa17.04■□□□□ 0.32
EBI3-202ENST00000599339 ARIH2O95376 493 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 TRDNQ13061 729 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 TJAP1Q5JTD0 557 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 ARHGEF16Q5VV41 709 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 DEFB128Q7Z7B8 93 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 PPM1EQ8WY54 764 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 TAAR1Q96RJ0 339 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 AMNQ9BXJ7 453 aa17.03■□□□□ 0.32
EBI3-202ENST00000599339 YBX2Q9Y2T7 364 aaKnown RBP17.03■□□□□ 0.32
EBI3-202ENST00000599339 MYH6P13533 1939 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 TTC28Q96AY4 2481 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 GBF1Q92538 1859 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 MMP3P08254 477 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
EBI3-202ENST00000599339 IGFBP4P22692 258 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 CHMP4BP1P59074 171 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 TRAF1Q13077 416 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 SLC9A7Q96T83 725 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
EBI3-202ENST00000599339 EIF3JO75822 258 aaKnown RBP17.01■□□□□ 0.31
EBI3-202ENST00000599339 CFBP00751 764 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 RABGGTBP53611 331 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 PTGISQ16647 500 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 CAGE1Q8TC20 777 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 FTOQ9C0B1 505 aaKnown RBP eCLIP17.01■□□□□ 0.31
EBI3-202ENST00000599339 MAP3K20Q9NYL2 800 aaKnown RBP17.01■□□□□ 0.31
EBI3-202ENST00000599339 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
EBI3-202ENST00000599339 KLRF2D3W0D1 207 aa17■□□□□ 0.31
EBI3-202ENST00000599339 IQCF3P0C7M6 154 aa17■□□□□ 0.31
EBI3-202ENST00000599339 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
EBI3-202ENST00000599339 ARHGAP1Q07960 439 aa17■□□□□ 0.31
EBI3-202ENST00000599339 DGKDQ16760 1214 aa17■□□□□ 0.31
EBI3-202ENST00000599339 LY6KQ17RY6 165 aa17■□□□□ 0.31
EBI3-202ENST00000599339 CHST3Q7LGC8 479 aa17■□□□□ 0.31
EBI3-202ENST00000599339 SESTD1Q86VW0 696 aa17■□□□□ 0.31
EBI3-202ENST00000599339 PHOSPHO2Q8TCD6 241 aa17■□□□□ 0.31
EBI3-202ENST00000599339 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
EBI3-202ENST00000599339 VWCEQ96DN2 955 aa17■□□□□ 0.31
EBI3-202ENST00000599339 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
EBI3-202ENST00000599339 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms