RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 ARVCFO00192 962 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 TLR3O15455 904 aaKnown RBP16.94■□□□□ 0.3
XRCC1-208ENST00000598422 CALM1P0DP23 149 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 CALM2P0DP24 149 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 CALM3P0DP25 149 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 EIF2AK2P19525 551 aaKnown RBP16.94■□□□□ 0.3
XRCC1-208ENST00000598422 SYNE3Q6ZMZ3 975 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 BADQ92934 168 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
XRCC1-208ENST00000598422 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
XRCC1-208ENST00000598422 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 GCOM1H8Y6P7 765 aaPredicted RBP16.93■□□□□ 0.3
XRCC1-208ENST00000598422 KIAA0355O15063 1070 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 CYTH3O43739 400 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 TXNP10599 105 aaKnown RBP16.93■□□□□ 0.3
XRCC1-208ENST00000598422 LIFRP42702 1097 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 HSD17B4P51659 736 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 KRT32Q14532 448 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 STXBP2Q15833 593 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 SLC35G1Q2M3R5 365 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 TMEM63BQ5T3F8 832 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 SEPT14Q6ZU15 432 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 SPZ1Q9BXG8 430 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 POLR3EQ9NVU0 708 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 MAP3K20Q9NYL2 800 aaKnown RBP16.93■□□□□ 0.3
XRCC1-208ENST00000598422 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
XRCC1-208ENST00000598422 RANBP2P49792 3224 aaKnown RBP16.92■□□□□ 0.3
XRCC1-208ENST00000598422 OPLAHO14841 1288 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 MYL3P08590 195 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 RXRAP19793 462 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 HOXA13P31271 388 aaPredicted RBP16.92■□□□□ 0.3
XRCC1-208ENST00000598422 FAAP100Q0VG06 881 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 PXMP2Q9NR77 195 aa16.92■□□□□ 0.3
XRCC1-208ENST00000598422 SOX1O00570 391 aaPredicted RBP16.91■□□□□ 0.3
XRCC1-208ENST00000598422 NR3C2P08235 984 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 CDK7P50613 346 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 FGD1P98174 961 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 GHRHRQ02643 423 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 LRIT3Q3SXY7 679 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 RAB11FIP4Q86YS3 637 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 LRCH3Q96II8 777 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 SEZ6LQ9BYH1 1024 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
XRCC1-208ENST00000598422 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 REC8O95072 547 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 PLEKHA8P1O95397 391 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 HMGB1P09429 215 aaKnown RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 SMARCA1P28370 1054 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 PSMC6P62333 389 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 FPGSQ05932 587 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 COL9A3Q14050 684 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 DHX32Q7L7V1 743 aaKnown RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 FAM126BQ8IXS8 530 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 COPS5Q92905 334 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 CUL5Q93034 780 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 PDCD2LQ9BRP1 358 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 MTG1Q9BT17 334 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-208ENST00000598422 TBX21Q9UL17 535 aa16.9■□□□□ 0.3
XRCC1-208ENST00000598422 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 KPNA6O60684 536 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 ARIH2O95376 493 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 GH1P01241 217 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
XRCC1-208ENST00000598422 ITGB8P26012 769 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 CCND2P30279 289 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 PURAQ00577 322 aaKnown RBP16.89■□□□□ 0.29
XRCC1-208ENST00000598422 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 TCEANC2Q96MN5 208 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 MCM3APO60318 1980 aa16.89■□□□□ 0.29
XRCC1-208ENST00000598422 TIMP1P01033 207 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 LY6KQ17RY6 165 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 ADCK5Q3MIX3 580 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 TSGA10IPQ3SY00 556 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 FAM47CQ5HY64 1035 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 CCDC62Q6P9F0 684 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 CMTR1Q8N1G2 835 aaKnown RBP16.88■□□□□ 0.29
XRCC1-208ENST00000598422 SRBD1Q8N5C6 995 aaKnown RBP16.88■□□□□ 0.29
XRCC1-208ENST00000598422 FANCBQ8NB91 859 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 SLC43A3Q8NBI5 491 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 SMARCC2Q8TAQ2 1214 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
XRCC1-208ENST00000598422 LCTP09848 1927 aa16.88■□□□□ 0.29
XRCC1-208ENST00000598422 A6NJR5 290 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 ZBTB43O43298 467 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 PGM5Q15124 567 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 SHHQ15465 462 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 RTN1Q16799 776 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms