RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 PFKMP08237 780 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
PNKP-202ENST00000593706 RPS6P62753 249 aaKnown RBP17.29■□□□□ 0.36
PNKP-202ENST00000593706 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 USH1GQ495M9 461 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 IL27Q8NEV9 243 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 SCFD2Q8WU76 684 aa17.29■□□□□ 0.36
PNKP-202ENST00000593706 RBM47A0AV96 593 aaKnown RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 B4DLN1 442 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 NKRFO15226 690 aaKnown RBP eCLIP17.28■□□□□ 0.36
PNKP-202ENST00000593706 ATP2A2P16615 1042 aaKnown RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 MRPL12P52815 198 aaKnown RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 MICALL1Q8N3F8 863 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 CLEC4DQ8WXI8 215 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 RNF41Q9H4P4 317 aaPredicted RBP17.28■□□□□ 0.36
PNKP-202ENST00000593706 PCDHA11Q9Y5I1 949 aa17.28■□□□□ 0.36
PNKP-202ENST00000593706 NEDD4P46934 1319 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 ACTN1P12814 892 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 CHMP4BP1P59074 171 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
PNKP-202ENST00000593706 TBC1D10CQ8IV04 446 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 ESR2Q92731 530 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 TTC14Q96N46 770 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 NOD1Q9Y239 953 aa17.27■□□□□ 0.36
PNKP-202ENST00000593706 SIP14410 1827 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 SNHG28P0DPA3 235 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 TXNP10599 105 aaKnown RBP17.26■□□□□ 0.35
PNKP-202ENST00000593706 MYOGP15173 224 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 NFRKBQ6P4R8 1299 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 PPP1R13LQ8WUF5 828 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
PNKP-202ENST00000593706 DOCK5Q9H7D0 1870 aa17.26■□□□□ 0.35
PNKP-202ENST00000593706 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
PNKP-202ENST00000593706 KPNA6O60684 536 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 EDNRBP24530 442 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 PDE4AP27815 886 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 RFC2P35250 354 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
PNKP-202ENST00000593706 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 RETREG2Q8NC44 543 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 COPS5Q92905 334 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 ASB2Q96Q27 587 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 BRWD1Q9NSI6 2320 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 MICAL3Q7RTP6 2002 aa17.25■□□□□ 0.35
PNKP-202ENST00000593706 A6NJR5 290 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 ZNF213O14771 459 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 BFSP2Q13515 415 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 CDC37Q16543 378 aaPredicted RBP17.24■□□□□ 0.35
PNKP-202ENST00000593706 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 ADAMTS19Q8TE59 1207 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
PNKP-202ENST00000593706 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
PNKP-202ENST00000593706 ABCB11O95342 1321 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
PNKP-202ENST00000593706 CA3P07451 260 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
PNKP-202ENST00000593706 CCDC155Q8N6L0 562 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 VWCEQ96DN2 955 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
PNKP-202ENST00000593706 GTPBP6O43824 516 aaPredicted RBP17.22■□□□□ 0.35
PNKP-202ENST00000593706 KDM4AO75164 1064 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 ARIH2O95376 493 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
PNKP-202ENST00000593706 CCDC178Q5BJE1 867 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 CHST3Q7LGC8 479 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 DGKHQ86XP1 1220 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 UHRF1Q96T88 793 aaPredicted RBP17.22■□□□□ 0.35
PNKP-202ENST00000593706 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 NLRC5Q86WI3 1866 aa17.22■□□□□ 0.35
PNKP-202ENST00000593706 MMP3P08254 477 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 SDSP20132 328 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 PTGISQ16647 500 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 ASPRV1Q53RT3 343 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 CWC27Q6UX04 472 aaKnown RBP17.21■□□□□ 0.35
PNKP-202ENST00000593706 RGS22Q8NE09 1264 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 NSUN6Q8TEA1 469 aaKnown RBP17.21■□□□□ 0.35
PNKP-202ENST00000593706 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 CERS4Q9HA82 394 aa17.21■□□□□ 0.35
PNKP-202ENST00000593706 B4E1Z4 1266 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 GH1P01241 217 aa17.2■□□□□ 0.34
PNKP-202ENST00000593706 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms