RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TBC1D5Q92609 795 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 ESR2Q92731 530 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 MPHOSPH6Q99547 160 aaKnown RBP19.18■□□□□ 0.66
LIG1-205ENST00000593425 RNF41Q9H4P4 317 aaPredicted RBP19.18■□□□□ 0.66
LIG1-205ENST00000593425 PCDHA11Q9Y5I1 949 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 RAD50Q92878 1312 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 PTPRSQ13332 1948 aa19.17■□□□□ 0.66
LIG1-205ENST00000593425 PFKMP08237 780 aa19.17■□□□□ 0.66
LIG1-205ENST00000593425 TXNP10599 105 aaKnown RBP19.17■□□□□ 0.66
LIG1-205ENST00000593425 ATP2A2P16615 1042 aaKnown RBP19.17■□□□□ 0.66
LIG1-205ENST00000593425 CDC37Q16543 378 aaPredicted RBP19.17■□□□□ 0.66
LIG1-205ENST00000593425 BRDTQ58F21 947 aaPredicted RBP19.17■□□□□ 0.66
LIG1-205ENST00000593425 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
LIG1-205ENST00000593425 DGKHQ86XP1 1220 aa19.17■□□□□ 0.66
LIG1-205ENST00000593425 SMC5Q8IY18 1101 aa19.17■□□□□ 0.66
LIG1-205ENST00000593425 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
LIG1-205ENST00000593425 MYO9BQ13459 2157 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 ZNF213O14771 459 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 KDM4AO75164 1064 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 MFAP1P55081 439 aaKnown RBP19.16■□□□□ 0.66
LIG1-205ENST00000593425 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 PNMA1Q8ND90 353 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 RGS22Q8NE09 1264 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 COL20A1Q9P218 1284 aa19.16■□□□□ 0.66
LIG1-205ENST00000593425 B4E1Z4 1266 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 TNFRSF10AO00220 468 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 KPNA6O60684 536 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 CCDC62Q6P9F0 684 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 CWC27Q6UX04 472 aaKnown RBP19.15■□□□□ 0.66
LIG1-205ENST00000593425 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 SYTL5Q8TDW5 730 aaPredicted RBP19.15■□□□□ 0.66
LIG1-205ENST00000593425 ASB2Q96Q27 587 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 TAAR1Q96RJ0 339 aa19.15■□□□□ 0.66
LIG1-205ENST00000593425 PITPNM1O00562 1244 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 IQCF3P0C7M6 154 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 RFC2P35250 354 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 PTPN11Q06124 597 aaPredicted RBP19.14■□□□□ 0.65
LIG1-205ENST00000593425 IQCA1Q86XH1 822 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 ADGRF4Q8IZF3 695 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 ABCB11O95342 1321 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 CHD7Q9P2D1 2997 aa19.14■□□□□ 0.65
LIG1-205ENST00000593425 TRIP12Q14669 1992 aaPredicted RBP19.13■□□□□ 0.65
LIG1-205ENST00000593425 TET1Q8NFU7 2136 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 B4DLN1 442 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 CA3P07451 260 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 MMP3P08254 477 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 MRPL12P52815 198 aaKnown RBP19.13■□□□□ 0.65
LIG1-205ENST00000593425 CHMP4BP1P59074 171 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 ARHGAP1Q07960 439 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 LY6KQ17RY6 165 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 QRICH1Q2TAL8 776 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 TMEM67Q5HYA8 995 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 SEPT14Q6ZU15 432 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 MICALL1Q8N3F8 863 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 ENAHQ8N8S7 591 aaPredicted RBP19.13■□□□□ 0.65
LIG1-205ENST00000593425 AFG1LQ8WV93 481 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 ANKS1AQ92625 1134 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 CTAGE1Q96RT6 745 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 ZSCAN10Q96SZ4 725 aaPredicted RBP19.13■□□□□ 0.65
LIG1-205ENST00000593425 OSBPL3Q9H4L5 887 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 KAT14Q9H8E8 782 aa19.13■□□□□ 0.65
LIG1-205ENST00000593425 COL4A4P53420 1690 aaPredicted RBP19.12■□□□□ 0.65
LIG1-205ENST00000593425 RFXAPO00287 272 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 ARHGEF15O94989 841 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 IGHDP01880 384 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 ACTN1P12814 892 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 MRPS5P82675 430 aaKnown RBP19.12■□□□□ 0.65
LIG1-205ENST00000593425 ASPRV1Q53RT3 343 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 RETREG2Q8NC44 543 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 SLC9A7Q96T83 725 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 CERS4Q9HA82 394 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 DIAPH3Q9NSV4 1193 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 NOD1Q9Y239 953 aa19.12■□□□□ 0.65
LIG1-205ENST00000593425 EPOPA6NHQ4 379 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 GH1P01241 217 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 NT5C2P49902 561 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 NUCB1Q02818 461 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 BFSP2Q13515 415 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 PTGISQ16647 500 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 CCDC178Q5BJE1 867 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 GDF6Q6KF10 455 aaPredicted RBP19.11■□□□□ 0.65
LIG1-205ENST00000593425 CHST3Q7LGC8 479 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 NSUN6Q8TEA1 469 aaKnown RBP19.11■□□□□ 0.65
LIG1-205ENST00000593425 KAT2BQ92831 832 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
LIG1-205ENST00000593425 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
LIG1-205ENST00000593425 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 ZSWIM5Q9P217 1185 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 MUC3AQ02505 3323 aa19.11■□□□□ 0.65
LIG1-205ENST00000593425 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 DHX16O60231 1041 aaKnown RBP19.1■□□□□ 0.65
LIG1-205ENST00000593425 RMDN3Q96TC7 470 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 DSCC1Q9BVC3 393 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 MAF1Q9H063 256 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 IL25Q9H293 177 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 VAT1LQ9HCJ6 419 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 MYH7BA7E2Y1 1941 aa19.1■□□□□ 0.65
LIG1-205ENST00000593425 OPLAHO14841 1288 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms