RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 SORBS3O60504 671 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 HSPD1P10809 573 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 BMP1P13497 986 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 CPT1AP50416 773 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 GPNMBQ14956 572 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 MTCH2Q9Y6C9 303 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 EDNRBP24530 442 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 PDE1AP54750 535 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 TAP1Q03518 808 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 SEPT14Q6ZU15 432 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
PRKCSH-220ENST00000593104 SUPT20HL2P0C7V6 817 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 DEFB103AP81534 67 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 ALX1Q15699 326 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 MCMDC2Q4G0Z9 681 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 GDF6Q6KF10 455 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 TAAR1Q96RJ0 339 aa13.17□□□□□ -0.3
PRKCSH-220ENST00000593104 A6NJR5 290 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 MMP3P08254 477 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 GRB10Q13322 594 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 PTGISQ16647 500 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 GDPD5Q8WTR4 605 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 KAT2BQ92831 832 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 WNT8BQ93098 351 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 LNPKQ9C0E8 428 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 NOD1Q9Y239 953 aa13.16□□□□□ -0.3
PRKCSH-220ENST00000593104 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 MYH6P13533 1939 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 LPXNO60711 386 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 PFKMP08237 780 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 ACTN1P12814 892 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 FAM117BQ6P1L5 589 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 SEZ6LQ9BYH1 1024 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
PRKCSH-220ENST00000593104 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 NBNO60934 754 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 ZNF286BP0CG31 522 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 WDR5P61964 334 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 HIC1Q14526 733 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
PRKCSH-220ENST00000593104 RAD50Q92878 1312 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 B4E1Z4 1266 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 TLL1O43897 1013 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 KDM4AO75164 1064 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 BFSP2Q13515 415 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
PRKCSH-220ENST00000593104 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 FAM86C2PA6NEL3 165 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 GH1P01241 217 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 SDSP20132 328 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 RFC2P35250 354 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms