RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 CUL5Q93034 780 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 LLPHQ9BRT6 129 aaKnown RBP11.19□□□□□ -0.62
TPM4-215ENST00000592138 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 PSTPIP2Q9H939 334 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 CNPY2Q9Y2B0 182 aa11.19□□□□□ -0.62
TPM4-215ENST00000592138 SEPT4O43236 478 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 CTDNEP1O95476 244 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
TPM4-215ENST00000592138 GJB1P08034 283 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 ZNF865P0CJ78 1059 aaPredicted RBP11.18□□□□□ -0.62
TPM4-215ENST00000592138 CCL5P13501 91 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 TRIM32Q13049 653 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 MTFR1Q15390 333 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
TPM4-215ENST00000592138 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 NSUN7Q8NE18 718 aaKnown RBP11.18□□□□□ -0.62
TPM4-215ENST00000592138 WASF1Q92558 559 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.621e-6■■□□□ 12.4
TPM4-215ENST00000592138 RMDN3Q96TC7 470 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.18□□□□□ -0.624e-6■■■■□ 25.8
TPM4-215ENST00000592138 RNF208Q9H0X6 261 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
TPM4-215ENST00000592138 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
TPM4-215ENST00000592138 SMCO2A6NFE2 343 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 STAM2O75886 525 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
TPM4-215ENST00000592138 XBP1P17861 261 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 GNA11P29992 359 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 GJA8P48165 433 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
TPM4-215ENST00000592138 ADCY7P51828 1080 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 ST3GAL1Q11201 340 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 AP3B2Q13367 1082 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 GALNT17Q6IS24 598 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 NOL8Q76FK4 1167 aaKnown RBP11.17□□□□□ -0.62
TPM4-215ENST00000592138 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 SMARCC2Q8TAQ2 1214 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 BICD2Q8TD16 824 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 PURBQ96QR8 312 aaKnown RBP11.17□□□□□ -0.62
TPM4-215ENST00000592138 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 PDCD2LQ9BRP1 358 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
TPM4-215ENST00000592138 AKR1A1P14550 325 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 CCND3P30281 292 aaPredicted RBP11.16□□□□□ -0.62
TPM4-215ENST00000592138 HOXA13P31271 388 aaPredicted RBP11.16□□□□□ -0.62
TPM4-215ENST00000592138 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
TPM4-215ENST00000592138 PDE4DQ08499 809 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 STXBP2Q15833 593 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 EHMT1Q9H9B1 1298 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
TPM4-215ENST00000592138 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
TPM4-215ENST00000592138 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
TPM4-215ENST00000592138 LCTP09848 1927 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 PLXNA1Q9UIW2 1896 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 EIF3JO75822 258 aaKnown RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 SGPL1O95470 568 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 NR3C2P08235 984 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 PGM5Q15124 567 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 LHX8Q68G74 356 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 VSIG10LQ86VR7 867 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 DAGLBQ8NCG7 672 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 VPS54Q9P1Q0 977 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
TPM4-215ENST00000592138 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.62
TPM4-215ENST00000592138 LRRC37A2A6NM11 1700 aa11.15□□□□□ -0.63
TPM4-215ENST00000592138 MYH6P13533 1939 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
TPM4-215ENST00000592138 EIF2AK2P19525 551 aaKnown RBP11.14□□□□□ -0.63
TPM4-215ENST00000592138 CCND2P30279 289 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM4-215ENST00000592138 NKX3-2P78367 333 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 UBE2SQ16763 222 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 IQSEC1Q6DN90 963 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms