RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
RFX1-206ENST00000589760 POTEMA6NI47 508 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 CCDC69A6NI79 296 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
RFX1-206ENST00000589760 SGPL1O95470 568 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 CAPN2P17655 700 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 RFC5P40937 340 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 LIFRP42702 1097 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 GJA8P48165 433 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 GRM4Q14833 912 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 PRPF38BQ5VTL8 546 aaKnown RBP16.86■□□□□ 0.29
RFX1-206ENST00000589760 ADGRF4Q8IZF3 695 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
RFX1-206ENST00000589760 KCNB2Q92953 911 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 CPVLQ9H3G5 476 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 MAD2L2Q9UI95 211 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 TSR3Q9UJK0 312 aaKnown RBP16.86■□□□□ 0.29
RFX1-206ENST00000589760 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
RFX1-206ENST00000589760 DNAJC25-GNG10A0A024R161 153 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 PALM3A6NDB9 673 aaPredicted RBP16.85■□□□□ 0.29
RFX1-206ENST00000589760 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
RFX1-206ENST00000589760 DHX16O60231 1041 aaKnown RBP16.85■□□□□ 0.29
RFX1-206ENST00000589760 CYP2C19P33261 490 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 MLLT1Q03111 559 aaPredicted RBP16.85■□□□□ 0.29
RFX1-206ENST00000589760 TROAPQ12815 778 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 QPCTQ16769 361 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
RFX1-206ENST00000589760 ZNF654Q8IZM8 581 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 VAT1LQ9HCJ6 419 aa16.85■□□□□ 0.29
RFX1-206ENST00000589760 KIAA1217Q5T5P2 1943 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 LILRB3O75022 631 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 DDAH1O94760 285 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 IGHA2P01877 340 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
RFX1-206ENST00000589760 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
RFX1-206ENST00000589760 GUCA2AQ02747 115 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
RFX1-206ENST00000589760 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
RFX1-206ENST00000589760 MUM1L1Q5H9M0 696 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 HLA-CQ95604 372 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 MAP3K14Q99558 947 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 LRRC2Q9BYS8 371 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
RFX1-206ENST00000589760 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 PFASO15067 1338 aa16.84■□□□□ 0.29
RFX1-206ENST00000589760 LRRC37A2A6NM11 1700 aa16.83■□□□□ 0.28
RFX1-206ENST00000589760 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.28
RFX1-206ENST00000589760 MSL3Q8N5Y2 521 aaKnown RBP16.83■□□□□ 0.28
RFX1-206ENST00000589760 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
RFX1-206ENST00000589760 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
RFX1-206ENST00000589760 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
RFX1-206ENST00000589760 USP26Q9BXU7 913 aa16.83■□□□□ 0.28
RFX1-206ENST00000589760 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
RFX1-206ENST00000589760 ALPK3Q96L96 1907 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 BRCA2P51587 3418 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 TFRCP02786 760 aaKnown RBP16.82■□□□□ 0.28
RFX1-206ENST00000589760 CALM1P0DP23 149 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 CALM2P0DP24 149 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 CALM3P0DP25 149 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 CYBAP13498 195 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 TAL1P17542 331 aaPredicted RBP16.82■□□□□ 0.28
RFX1-206ENST00000589760 KIF5BP33176 963 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 USH1GQ495M9 461 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 SGMS1Q86VZ5 419 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 PCDHGC3Q9UN70 934 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 SLC12A7Q9Y666 1083 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
RFX1-206ENST00000589760 ABCB11O95342 1321 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 MSCO60682 206 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
RFX1-206ENST00000589760 PSMA5P28066 241 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 CNGA1P29973 690 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 FAM133AQ8N9E0 248 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
RFX1-206ENST00000589760 MYL10Q9BUA6 226 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 RIOX1Q9H6W3 641 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
RFX1-206ENST00000589760 SYNGAP1Q96PV0 1343 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 NFIBO00712 420 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 ZBTB5O15062 677 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 GNAQP50148 359 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 CNTN2Q02246 1040 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 PRAMEF19Q5SWL8 479 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
RFX1-206ENST00000589760 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms