RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 UBXN2AP68543 259 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 ANKRD35Q8N283 1001 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 CRYGNQ8WXF5 182 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 EFCC1Q9HA90 598 aa28.16■■■□□ 2.1
RFX1-205ENST00000589239 RBBP6Q7Z6E9 1792 aaKnown RBP28.16■■■□□ 2.1
RFX1-205ENST00000589239 ARHGAP4P98171 946 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 SLC39A14Q15043 492 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 WDR78Q5VTH9 848 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 TMEM87AQ8NBN3 555 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 ADGRA2Q96PE1 1338 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 MRVI1Q9Y6F6 885 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 FAM110CQ1W6H9 321 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 TPRNQ4KMQ1 711 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 TAAR1Q96RJ0 339 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 LMBRD1Q9NUN5 540 aa28.15■■■□□ 2.1
RFX1-205ENST00000589239 SPTLC2O15270 562 aa28.14■■■□□ 2.1
RFX1-205ENST00000589239 MARCKSP29966 332 aaPredicted RBP28.14■■■□□ 2.1
RFX1-205ENST00000589239 COPB2P35606 906 aa28.14■■■□□ 2.1
RFX1-205ENST00000589239 MYH7BA7E2Y1 1941 aa28.14■■■□□ 2.09
RFX1-205ENST00000589239 DDX11L8A8MPP1 907 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 TDP2O95551 362 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 CCNA1P78396 465 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 CSPP1Q1MSJ5 1256 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 MROH8Q9H579 483 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 ELP1O95163 1332 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 TLR2O60603 784 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 CRHR2Q13324 411 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 SHCBP1Q8NEM2 672 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 KCNG4Q8TDN1 519 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 ZFYVE28Q9HCC9 887 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 CEP131Q9UPN4 1083 aa28.13■■■□□ 2.09
RFX1-205ENST00000589239 GADD45BO75293 160 aaPredicted RBP28.12■■■□□ 2.09
RFX1-205ENST00000589239 VEGFBP49765 207 aa28.12■■■□□ 2.09
RFX1-205ENST00000589239 USP11P51784 963 aa28.12■■■□□ 2.09
RFX1-205ENST00000589239 PTGDRQ13258 359 aa28.12■■■□□ 2.09
RFX1-205ENST00000589239 RMDN3Q96TC7 470 aa28.12■■■□□ 2.09
RFX1-205ENST00000589239 EHMT1Q9H9B1 1298 aa28.12■■■□□ 2.09
RFX1-205ENST00000589239 BCRP11274 1271 aa28.11■■■□□ 2.09
RFX1-205ENST00000589239 ME1P48163 572 aa28.11■■■□□ 2.09
RFX1-205ENST00000589239 PFASO15067 1338 aa28.11■■■□□ 2.09
RFX1-205ENST00000589239 RPTORQ8N122 1335 aa28.11■■■□□ 2.09
RFX1-205ENST00000589239 EIF2AK2P19525 551 aaKnown RBP28.1■■■□□ 2.09
RFX1-205ENST00000589239 PPP4R3AQ6IN85 833 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 MAF1Q9H063 256 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 TMEM60Q9H2L4 133 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 SLC37A4O43826 429 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 C17orf99Q6UX52 265 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 CCAR1Q8IX12 1150 aaKnown RBP28.1■■■□□ 2.09
RFX1-205ENST00000589239 C4orf32Q8N8J7 132 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 IL31RAQ8NI17 732 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 MMP19Q99542 508 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 PXMP2Q9NR77 195 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 PCDHA7Q9UN72 937 aa28.1■■■□□ 2.09
RFX1-205ENST00000589239 CA12O43570 354 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 NEMFO60524 1076 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 ATP2C1P98194 919 aaPredicted RBP28.09■■■□□ 2.09
RFX1-205ENST00000589239 CNTN2Q02246 1040 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.09■■■□□ 2.09
RFX1-205ENST00000589239 POTEDQ86YR6 584 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 ZFP91Q96JP5 570 aaPredicted RBP28.09■■■□□ 2.09
RFX1-205ENST00000589239 FAM86B1E9PN63 330 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 PPP6R2O75170 966 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 BMP15O95972 392 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 CYP3A4P08684 503 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 FAM86B2P0C5J1 330 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 KCTD2Q14681 263 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 ARHGEF16Q5VV41 709 aa28.09■■■□□ 2.09
RFX1-205ENST00000589239 DDX25Q9UHL0 483 aaKnown RBP28.09■■■□□ 2.09
RFX1-205ENST00000589239 FRMPD4Q14CM0 1322 aa28.08■■■□□ 2.09
RFX1-205ENST00000589239 FCER1AP12319 257 aa28.08■■■□□ 2.09
RFX1-205ENST00000589239 CYP2W1Q8TAV3 490 aa28.08■■■□□ 2.09
RFX1-205ENST00000589239 ECM2O94769 699 aaPredicted RBP28.07■■■□□ 2.08
RFX1-205ENST00000589239 ALDH1A1P00352 501 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 PGK2P07205 417 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 PGM5Q15124 567 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 REM2Q8IYK8 340 aaPredicted RBP28.07■■■□□ 2.08
RFX1-205ENST00000589239 PDCD2LQ9BRP1 358 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 CYP3A7-CYP3A51PA0A087WV96 503 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 POTEB2H3BUK9 544 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 GCFC2P16383 781 aaKnown RBP28.07■■■□□ 2.08
RFX1-205ENST00000589239 CYP3A7P24462 503 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 ZNF76P36508 570 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 CLIC6Q96NY7 704 aa28.07■■■□□ 2.08
RFX1-205ENST00000589239 CIITAP33076 1130 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 GRIN1Q05586 938 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 ORC2Q13416 577 aaPredicted RBP28.06■■■□□ 2.08
RFX1-205ENST00000589239 JMYQ8N9B5 988 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 NSUN6Q8TEA1 469 aaKnown RBP28.06■■■□□ 2.08
RFX1-205ENST00000589239 NAP1L4Q99733 375 aaKnown RBP28.06■■■□□ 2.08
RFX1-205ENST00000589239 FBXO2Q9UK22 296 aaPredicted RBP28.06■■■□□ 2.08
RFX1-205ENST00000589239 ASTN1O14525 1302 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 MAP2K2P36507 400 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 PRR16Q569H4 304 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 MOXD1Q6UVY6 613 aa28.06■■■□□ 2.08
RFX1-205ENST00000589239 DDX49Q9Y6V7 483 aaKnown RBP28.06■■■□□ 2.08
RFX1-205ENST00000589239 UBE2HP62256 183 aa28.05■■■□□ 2.08
RFX1-205ENST00000589239 GPR142Q7Z601 462 aa28.05■■■□□ 2.08
RFX1-205ENST00000589239 FAM133AQ8N9E0 248 aa28.05■■■□□ 2.08
RFX1-205ENST00000589239 KRI1Q8N9T8 703 aaKnown RBP28.05■■■□□ 2.08
RFX1-205ENST00000589239 MBOAT7Q96N66 472 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms