RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 SMARCC2Q8TAQ2 1214 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 RNF208Q9H0X6 261 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 TMEM260Q9NX78 707 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 MAP3K20Q9NYL2 800 aaKnown RBP11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 VPS54Q9P1Q0 977 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
CHAF1A-206ENST00000587739 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 RBM47A0AV96 593 aaKnown RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 ASB14A6NK59 587 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 M0R2N6 131 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 SGPL1O95470 568 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 GJB1P08034 283 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 NR3C2P08235 984 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 UBXN2AP68543 259 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 MRPS9P82933 396 aaKnown RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 ZSCAN31Q96LW9 406 aaPredicted RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 DEFB118Q96PH6 123 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 ZMYND12Q9H0C1 365 aa11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 HMX1Q9NP08 348 aaPredicted RBP11.23□□□□□ -0.61
CHAF1A-206ENST00000587739 CPLX1O14810 134 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 DEXIO95424 95 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 GJA8P48165 433 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 NAPAP54920 295 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 TRAF1Q13077 416 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 FRMPD4Q14CM0 1322 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 PGM5Q15124 567 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 FBXO16Q8IX29 292 aaPredicted RBP11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 PGBD1Q96JS3 809 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 ORC3Q9UBD5 711 aaPredicted RBP11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 PCDHA6Q9UN73 950 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 PCDHA8Q9Y5H6 950 aa11.22□□□□□ -0.61
CHAF1A-206ENST00000587739 STK36Q9NRP7 1315 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ESYT2A0FGR8 921 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 CTAGE5O15320 804 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 SEPT4O43236 478 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ARIH2O95376 493 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 SMPD1P17405 629 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 CNGA1P29973 690 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 SEMA3FQ13275 785 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ARHGEF16Q5VV41 709 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 UBE2Q1Q7Z7E8 422 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 RASGRP4Q8TDF6 673 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 U2AF1L4Q8WU68 220 aaKnown RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 SH3GLB2Q9NR46 395 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
CHAF1A-206ENST00000587739 LOC102724159A0A0B4J2E5 919 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 ST18O60284 1047 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 MYCLP12524 364 aaPredicted RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 ADCY7P51828 1080 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 AKAP17AQ02040 695 aaKnown RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 SP2Q02086 613 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 CUL4AQ13619 759 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 PWP2Q15269 919 aaKnown RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 JAKMIP3Q5VZ66 844 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 CCDC62Q6P9F0 684 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 CYP2W1Q8TAV3 490 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 COPS5Q92905 334 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 CUL5Q93034 780 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 LLPHQ9BRT6 129 aaKnown RBP11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 TMEM106CQ9BVX2 250 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
CHAF1A-206ENST00000587739 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 932.8 ms