RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 METAP2P50579 478 aaKnown RBP eCLIP13.53□□□□□ -0.241e-13■■■□□ 15.3
PRKCSH-206ENST00000587509 NKX3-2P78367 333 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 KCNA10Q16322 511 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 VTI1AQ96AJ9 217 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 POLR3EQ9NVU0 708 aa13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 ZMYND8Q9ULU4 1186 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 GNEQ9Y223 722 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-206ENST00000587509 DCDC2CA8MYV0 355 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 CYTH3O43739 400 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 STAM2O75886 525 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 ASGR1P07306 291 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 SMPD1P17405 629 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 RXRAP19793 462 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 CCND2P30279 289 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 EXOSC10Q01780 885 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 ADCK5Q3MIX3 580 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 TRIM60Q495X7 471 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 OR6J1Q8NGC5 347 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 PURBQ96QR8 312 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 GLT8D2Q9H1C3 349 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 ALPK3Q96L96 1907 aa13.52□□□□□ -0.25
PRKCSH-206ENST00000587509 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 KPNA6O60684 536 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 PQBP1O60828 265 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 PPP1R11O60927 126 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 PLEKHA8P1O95397 391 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 CLTBP09497 229 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 TXNP10599 105 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
PRKCSH-206ENST00000587509 MYADML2A6NDP7 307 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 ADCY6O43306 1168 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 GH1P01241 217 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 NR3C2P08235 984 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 SYN1P17600 705 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 HOXA13P31271 388 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 CCSAPQ6IQ19 270 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 XRRA1Q6P2D8 792 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 CCDC12Q8WUD4 166 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 BRF1Q92994 677 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 PDGFCQ9NRA1 345 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
PRKCSH-206ENST00000587509 NID2Q14112 1375 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 OPLAHO14841 1288 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 MYCLP12524 364 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 BMP8BP34820 402 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 CPLX2Q6PUV4 134 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 SEPT14Q6ZU15 432 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 Q6ZUG5 572 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 ANKRD33Q7Z3H0 272 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 RAB11FIP4Q86YS3 637 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
PRKCSH-206ENST00000587509 FRMPD4Q14CM0 1322 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 ARVCFO00192 962 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 TGFB3P10600 412 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 MAGEA10P43363 369 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 NAPAP54920 295 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 ANAPC15P60006 121 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 BEX3Q00994 111 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 TLE2Q04725 743 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 PGM5Q15124 567 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 SLC35G1Q2M3R5 365 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms