RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 PCSK9Q8NBP7 692 aaKnown RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 TSEN34Q9BSV6 310 aaKnown RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 PXMP2Q9NR77 195 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 MAP3K20Q9NYL2 800 aaKnown RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 ZMYND8Q9ULU4 1186 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 MOXD2PA6NHM9 499 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 METAP2P50579 478 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATG4D-207ENST00000587256 IRX5P78411 483 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-207ENST00000587256 KCNA10Q16322 511 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 SLC39A5Q6ZMH5 540 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 SAMD3Q8N6K7 520 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 KLHDC9Q8NEP7 349 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 IWS1Q96ST2 819 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
ATG4D-207ENST00000587256 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-207ENST00000587256 SYN1P17600 705 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 PTGS1P23219 599 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 BEX3Q00994 111 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 STXBP2Q15833 593 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
ATG4D-207ENST00000587256 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 DUSP28Q4G0W2 176 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 HEATR3Q7Z4Q2 680 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 CUL5Q93034 780 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
ATG4D-207ENST00000587256 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 EIF5BO60841 1220 aaKnown RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 ASGR1P07306 291 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 NR3C2P08235 984 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 MYCLP12524 364 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 TTLL4Q14679 1199 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 TMEM63BQ5T3F8 832 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 CCSAPQ6IQ19 270 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 OR6J1Q8NGC5 347 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
ATG4D-207ENST00000587256 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 Q9Y3F1 56 aa17.09■□□□□ 0.33
ATG4D-207ENST00000587256 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATG4D-207ENST00000587256 ZEB2O60315 1214 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 SNX17Q15036 470 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
ATG4D-207ENST00000587256 PRDM5Q9NQX1 630 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-207ENST00000587256 NID2Q14112 1375 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 CTAGE5O15320 804 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
ATG4D-207ENST00000587256 CDC27P30260 824 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 CCND2P30279 289 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 CPT1AP50416 773 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 NKX3-2P78367 333 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 PGM5Q15124 567 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 C1orf53Q5VUE5 145 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 AGXT2Q9BYV1 514 aa17.07■□□□□ 0.32
ATG4D-207ENST00000587256 ELP1O95163 1332 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 ARIH2O95376 493 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 NAPAP54920 295 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 CXCL17Q6UXB2 119 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 COPS5Q92905 334 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 MRVI1Q9Y6F6 885 aa17.06■□□□□ 0.32
ATG4D-207ENST00000587256 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-207ENST00000587256 hCG_1984214I3L0E3 225 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 CABYRO75952 493 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
ATG4D-207ENST00000587256 TLE2Q04725 743 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 FUT2Q10981 343 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 TOB2Q14106 344 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-207ENST00000587256 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 ZNF713Q8N859 430 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-207ENST00000587256 PDRG1Q9NUG6 133 aa17.05■□□□□ 0.32
ATG4D-207ENST00000587256 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms