RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ARMCX2Q7L311 632 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 TNS4Q8IZW8 715 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 PURBQ96QR8 312 aaKnown RBP21.99■■□□□ 1.11
DDX39A-204ENST00000586558 TAAR1Q96RJ0 339 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 ALG1Q9BT22 464 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 PXMP2Q9NR77 195 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-204ENST00000586558 KIF3AQ9Y496 699 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 FRMPD4Q14CM0 1322 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 SPDYE3A6NKU9 549 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 K7ELQ4 463 aaPredicted RBP21.98■■□□□ 1.11
DDX39A-204ENST00000586558 FOSP01100 380 aaPredicted RBP21.98■■□□□ 1.11
DDX39A-204ENST00000586558 NLRP5P59047 1200 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 AP3B2Q13367 1082 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 ARHGEF16Q5VV41 709 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 FCHSD1Q86WN1 690 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 ABHD16BQ9H3Z7 469 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.98■■□□□ 1.11
DDX39A-204ENST00000586558 LCTP09848 1927 aa21.98■■□□□ 1.11
DDX39A-204ENST00000586558 SNAI1O95863 264 aaPredicted RBP21.97■■□□□ 1.11
DDX39A-204ENST00000586558 CYBAP13498 195 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 PDE4DQ08499 809 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 TRIM32Q13049 653 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 CUL4AQ13619 759 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 UBE2SQ16763 222 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 REXO1Q8N1G1 1221 aaKnown RBP21.97■■□□□ 1.11
DDX39A-204ENST00000586558 AIFM3Q96NN9 605 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 PDCD2LQ9BRP1 358 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 EHMT1Q9H9B1 1298 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 HMX1Q9NP08 348 aaPredicted RBP21.97■■□□□ 1.11
DDX39A-204ENST00000586558 RPTORQ8N122 1335 aa21.97■■□□□ 1.11
DDX39A-204ENST00000586558 EIF2AK2P19525 551 aaKnown RBP21.96■■□□□ 1.11
DDX39A-204ENST00000586558 CLK2P49760 499 aaKnown RBP21.96■■□□□ 1.11
DDX39A-204ENST00000586558 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
DDX39A-204ENST00000586558 DAGLBQ8NCG7 672 aa21.96■■□□□ 1.11
DDX39A-204ENST00000586558 SHISA4Q96DD7 197 aa21.96■■□□□ 1.11
DDX39A-204ENST00000586558 VTA1Q9NP79 307 aa21.96■■□□□ 1.11
DDX39A-204ENST00000586558 NR3C2P08235 984 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 CCL5P13501 91 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 TRIM29Q14134 588 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 XRRA1Q6P2D8 792 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 FAM184AQ8NB25 1140 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 ABHD8Q96I13 439 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 PHF20Q9BVI0 1012 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 PCDHA4Q9UN74 947 aa21.95■■□□□ 1.1
DDX39A-204ENST00000586558 DTNBO60941 627 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 CCND2P30279 289 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 ACVR2BQ13705 512 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 PGM5Q15124 567 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 STXBP2Q15833 593 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.94■■□□□ 1.11e-7■■□□□ 11.6
DDX39A-204ENST00000586558 PCDHA6Q9UN73 950 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 PCDHA8Q9Y5H6 950 aa21.94■■□□□ 1.1
DDX39A-204ENST00000586558 MSCO60682 206 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 STAM2O75886 525 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 ZNF865P0CJ78 1059 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-204ENST00000586558 MTFR1Q15390 333 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 VSIG10LQ86VR7 867 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 BLIDQ8IZY5 108 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 TRPV1Q8NER1 839 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
DDX39A-204ENST00000586558 KATNBL1Q9H079 304 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 RNF208Q9H0X6 261 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 UNC93B1Q9H1C4 597 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 BRMS1Q9HCU9 246 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 PAK6Q9NQU5 681 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-204ENST00000586558 ZHX1Q9UKY1 873 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-204ENST00000586558 SMC3Q9UQE7 1217 aa21.93■■□□□ 1.1
DDX39A-204ENST00000586558 SEPT4O43236 478 aa21.92■■□□□ 1.1
DDX39A-204ENST00000586558 EIF3JO75822 258 aaKnown RBP21.92■■□□□ 1.1
DDX39A-204ENST00000586558 CCND3P30281 292 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-204ENST00000586558 NPY5RQ15761 445 aa21.92■■□□□ 1.1
DDX39A-204ENST00000586558 PCNX4Q63HM2 1172 aa21.92■■□□□ 1.1
DDX39A-204ENST00000586558 ANO3Q9BYT9 981 aa21.92■■□□□ 1.1
DDX39A-204ENST00000586558 KCNJ14Q9UNX9 436 aa21.92■■□□□ 1.1
DDX39A-204ENST00000586558 AKR1A1P14550 325 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 CAPN2P17655 700 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 CNGA1P29973 690 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 SREBF1P36956 1147 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 PRAMEF19Q5SWL8 479 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 JAKMIP3Q5VZ66 844 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 FBXO16Q8IX29 292 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-204ENST00000586558 IL31RAQ8NI17 732 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 C8orf76Q96K31 380 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 TMEM106CQ9BVX2 250 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 TMEM260Q9NX78 707 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 FAM184BQ9ULE4 1060 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
DDX39A-204ENST00000586558 LRRC37A2A6NM11 1700 aa21.91■■□□□ 1.1
DDX39A-204ENST00000586558 MMP1P03956 469 aa21.9■■□□□ 1.1
DDX39A-204ENST00000586558 GJB1P08034 283 aa21.9■■□□□ 1.1
DDX39A-204ENST00000586558 MYCLP12524 364 aaPredicted RBP21.9■■□□□ 1.1
DDX39A-204ENST00000586558 GJB2P29033 226 aa21.9■■□□□ 1.1
DDX39A-204ENST00000586558 KRT40Q6A162 431 aa21.9■■□□□ 1.1
DDX39A-204ENST00000586558 GJB4Q9NTQ9 266 aa21.9■■□□□ 1.1
DDX39A-204ENST00000586558 DDX20Q9UHI6 824 aaKnown RBP21.9■■□□□ 1.1
DDX39A-204ENST00000586558 RBM47A0AV96 593 aaKnown RBP21.89■■□□□ 1.09
DDX39A-204ENST00000586558 M0R2N6 131 aa21.89■■□□□ 1.09
DDX39A-204ENST00000586558 MYCP01106 439 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-204ENST00000586558 KRT2P35908 639 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms