RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 UBE2SQ16763 222 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 DAGLBQ8NCG7 672 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 TINF2Q9BSI4 451 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 SOWAHBA6NEL2 793 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 DTNBO60941 627 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 ELNP15502 786 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 FOSBP53539 338 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 UBXN2AP68543 259 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 MAMDC4Q6UXC1 1216 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 BLIDQ8IZY5 108 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 TAAR1Q96RJ0 339 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 COL20A1Q9P218 1284 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
SCAMP4-209ENST00000585335 H3BQV1 296 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 EIF2AK2P19525 551 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 KRT2P35908 639 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 CCL14Q16627 93 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 TRIB2Q92519 343 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 NRBP1Q9UHY1 535 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
SCAMP4-209ENST00000585335 MMP1P03956 469 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 CCND2P30279 289 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 JAKMIP3Q5VZ66 844 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 KRT40Q6A162 431 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 FGD4Q96M96 766 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 PURBQ96QR8 312 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 MCOLN1Q9GZU1 580 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 FLRT1Q9NZU1 646 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 FRMPD4Q14CM0 1322 aa16.68■□□□□ 0.26
SCAMP4-209ENST00000585335 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 INHAP05111 366 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 NR3C2P08235 984 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 CYP2C19P33261 490 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 CLK2P49760 499 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 STXBP2Q15833 593 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
SCAMP4-209ENST00000585335 STAM2O75886 525 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 EDNRBP24530 442 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 GUCY1B3Q02153 619 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 PGM5Q15124 567 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 SH3TC2Q8TF17 1288 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 SHISA4Q96DD7 197 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 VTA1Q9NP79 307 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 TMEM260Q9NX78 707 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 ZHX1Q9UKY1 873 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 LCTP09848 1927 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 ASTN1O14525 1302 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
SCAMP4-209ENST00000585335 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 PDIA4P13667 645 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 SREBF1P36956 1147 aa16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 NONOQ15233 471 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 PCNX4Q63HM2 1172 aa16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
SCAMP4-209ENST00000585335 SNAI1O95863 264 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 ZNF76P36508 570 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 NPY5RQ15761 445 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 GNPTABQ3T906 1256 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 ARMC5Q96C12 935 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 PGBD1Q96JS3 809 aa16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 FOXP1Q9H334 677 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 HMX1Q9NP08 348 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-209ENST00000585335 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 IGHA2P01877 340 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 CYBAP13498 195 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 CNGA1P29973 690 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 ARHGAP4P98171 946 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 MAP3K21Q5TCX8 1036 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 NAP1L4Q99733 375 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
SCAMP4-209ENST00000585335 BTBD18B2RXH4 712 aa16.62■□□□□ 0.25
SCAMP4-209ENST00000585335 M0R2N6 131 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms