RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NUDT12Q9BQG2 462 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
RFFL-211ENST00000584541 DNAJC25-GNG10A0A024R161 153 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 KIF28PB7ZC32 967 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 PGK2P07205 417 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 FAM133AQ8N9E0 248 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 NSUN6Q8TEA1 469 aaKnown RBP20.9■□□□□ 0.94
RFFL-211ENST00000584541 PGBD1Q96JS3 809 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 TAAR1Q96RJ0 339 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 COL20A1Q9P218 1284 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 TSKSQ9UJT2 592 aa20.9■□□□□ 0.94
RFFL-211ENST00000584541 HOXD10P28358 340 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 CNTN2Q02246 1040 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 RESTQ13127 1097 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 MAP2K5Q13163 448 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 MORN1Q5T089 497 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 CD99L2Q8TCZ2 262 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 ZNF296Q8WUU4 475 aaPredicted RBP20.89■□□□□ 0.93
RFFL-211ENST00000584541 TRIM47Q96LD4 638 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 PXMP2Q9NR77 195 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 ATP6V1DQ9Y5K8 247 aa20.89■□□□□ 0.93
RFFL-211ENST00000584541 GNRH1P01148 92 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 SREBF1P36956 1147 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 RGS2P41220 211 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 INF2Q27J81 1249 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 TBCKQ8TEA7 893 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 ARHGAP39Q9C0H5 1083 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 DIS3Q9Y2L1 958 aaKnown RBP20.88■□□□□ 0.93
RFFL-211ENST00000584541 CASP8AP2Q9UKL3 1982 aa20.88■□□□□ 0.93
RFFL-211ENST00000584541 FRMPD4Q14CM0 1322 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 RPTORQ8N122 1335 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 LOC102724159A0A0B4J2E5 919 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 EIF2AK2P19525 551 aaKnown RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 CTGFP29279 349 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 ALDH5A1P51649 535 aaPredicted RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 ARHGAP4P98171 946 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 PWP2Q15269 919 aaKnown RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 ZNF792Q3KQV3 632 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 RILPL1Q5EBL4 403 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 COL13A1Q5TAT6 717 aaPredicted RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 NEK8Q86SG6 692 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 PURBQ96QR8 312 aaKnown RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 NAP1L4Q99733 375 aaKnown RBP20.87■□□□□ 0.93
RFFL-211ENST00000584541 ZDHHC9Q9Y397 364 aa20.87■□□□□ 0.93
RFFL-211ENST00000584541 SOWAHBA6NEL2 793 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 COBLO75128 1261 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 CAPN15O75808 1086 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 TRAPPC10P48553 1259 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 USP11P51784 963 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 PGM5Q15124 567 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 EARS2Q5JPH6 523 aaKnown RBP20.86■□□□□ 0.93
RFFL-211ENST00000584541 XRRA1Q6P2D8 792 aa20.86■□□□□ 0.93
RFFL-211ENST00000584541 ZNF467Q7Z7K2 595 aaPredicted RBP20.86■□□□□ 0.93
RFFL-211ENST00000584541 FAM205CA6NFA0 338 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 ASB14A6NK59 587 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 HOXC6P09630 235 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 MYCLP12524 364 aaPredicted RBP20.85■□□□□ 0.93
RFFL-211ENST00000584541 CCND2P30279 289 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 ZNF76P36508 570 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 UBXN2AP68543 259 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 PCNX4Q63HM2 1172 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 USP6NLQ92738 828 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 APBA2Q99767 749 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 PDCD2LQ9BRP1 358 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 MCM3APO60318 1980 aa20.85■□□□□ 0.93
RFFL-211ENST00000584541 NR3C2P08235 984 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 CYP3A4P08684 503 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 CYP2B6P20813 491 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 PDE4DQ08499 809 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 LETM2Q2VYF4 491 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 MAML3Q96JK9 1138 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 ZNF396Q96N95 335 aaPredicted RBP20.84■□□□□ 0.93
RFFL-211ENST00000584541 LRRC37A2A6NM11 1700 aa20.84■□□□□ 0.93
RFFL-211ENST00000584541 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 STAM2O75886 525 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 GCFC2P16383 781 aaKnown RBP20.83■□□□□ 0.93
RFFL-211ENST00000584541 FLT3LGP49771 235 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 PRMT2P55345 433 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 STXBP2Q15833 593 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 TTC38Q5R3I4 469 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
RFFL-211ENST00000584541 NPLOC4Q8TAT6 608 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 CRYGNQ8WXF5 182 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 SRRDQ9UH36 339 aa20.83■□□□□ 0.93
RFFL-211ENST00000584541 CCNT1O60563 726 aaKnown RBP20.82■□□□□ 0.92
RFFL-211ENST00000584541 SLC34A2O95436 690 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 HSPA1AP0DMV8 641 aaKnown RBP20.82■□□□□ 0.92
RFFL-211ENST00000584541 HSPA1BP0DMV9 641 aaKnown RBP20.82■□□□□ 0.92
RFFL-211ENST00000584541 XRCC5P13010 732 aaKnown RBP20.82■□□□□ 0.92
RFFL-211ENST00000584541 PRKCZQ05513 592 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 ATL3Q6DD88 541 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
RFFL-211ENST00000584541 FGD4Q96M96 766 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 GABRQQ9UN88 632 aa20.82■□□□□ 0.92
RFFL-211ENST00000584541 ASTN1O14525 1302 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms