RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
CCDC57-218ENST00000583593 ARHGEF15O94989 841 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 CA3P07451 260 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 IQCF3P0C7M6 154 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 TXNP10599 105 aaKnown RBP15.82■□□□□ 0.12
CCDC57-218ENST00000583593 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
CCDC57-218ENST00000583593 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
CCDC57-218ENST00000583593 FAM47CQ5HY64 1035 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 CCDC62Q6P9F0 684 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 MFSD6Q6ZSS7 791 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 RGS22Q8NE09 1264 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 ZKSCAN3Q9BRR0 538 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 NEDD4P46934 1319 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 CCDC171Q6TFL3 1326 aa15.82■□□□□ 0.12
CCDC57-218ENST00000583593 BDP1A6H8Y1 2624 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 EPOPA6NHQ4 379 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 KPNA6O60684 536 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
CCDC57-218ENST00000583593 POU3F3P20264 500 aaPredicted RBP15.81■□□□□ 0.12
CCDC57-218ENST00000583593 PTPN11Q06124 597 aaPredicted RBP15.81■□□□□ 0.12
CCDC57-218ENST00000583593 GPNMBQ14956 572 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 USH1GQ495M9 461 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 TMEM67Q5HYA8 995 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 UHRF1Q96T88 793 aaPredicted RBP15.81■□□□□ 0.12
CCDC57-218ENST00000583593 CERS4Q9HA82 394 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 COL20A1Q9P218 1284 aa15.81■□□□□ 0.12
CCDC57-218ENST00000583593 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
CCDC57-218ENST00000583593 PRRC2BQ5JSZ5 2229 aaKnown RBP15.8■□□□□ 0.12
CCDC57-218ENST00000583593 KIAA1217Q5T5P2 1943 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 LAMA4Q16363 1823 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 RAD50Q92878 1312 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 BMP1P13497 986 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 COL9A1P20849 921 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 RFC2P35250 354 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 TFF2Q03403 129 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 BRDTQ58F21 947 aaPredicted RBP15.8■□□□□ 0.12
CCDC57-218ENST00000583593 MICALL1Q8N3F8 863 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 PHOSPHO2Q8TCD6 241 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 TAAR1Q96RJ0 339 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 SLC9A7Q96T83 725 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 MTCH2Q9Y6C9 303 aa15.8■□□□□ 0.12
CCDC57-218ENST00000583593 NCOR1O75376 2440 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 RBAK-RBAKDNI3L0D1 243 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 ACTN1P12814 892 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 SDSP20132 328 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 TAP1Q03518 808 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 ARHGAP1Q07960 439 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 LY6KQ17RY6 165 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 GPATCH4Q5T3I0 446 aaKnown RBP15.79■□□□□ 0.12
CCDC57-218ENST00000583593 KRT40Q6A162 431 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 DGKHQ86XP1 1220 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 SYTL5Q8TDW5 730 aaPredicted RBP15.79■□□□□ 0.12
CCDC57-218ENST00000583593 AFG1LQ8WV93 481 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 KAT2BQ92831 832 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 NECAB3Q96P71 396 aaPredicted RBP15.79■□□□□ 0.12
CCDC57-218ENST00000583593 MPHOSPH6Q99547 160 aaKnown RBP15.79■□□□□ 0.12
CCDC57-218ENST00000583593 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 RAPGEFL1Q9UHV5 662 aa15.79■□□□□ 0.12
CCDC57-218ENST00000583593 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 MMP3P08254 477 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 BFSP2Q13515 415 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 CDC37Q16543 378 aaPredicted RBP15.78■□□□□ 0.12
CCDC57-218ENST00000583593 PTGISQ16647 500 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 GDF6Q6KF10 455 aaPredicted RBP15.78■□□□□ 0.12
CCDC57-218ENST00000583593 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 HERC6Q8IVU3 1022 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 ADGRF4Q8IZF3 695 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 PNMA1Q8ND90 353 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 ANKS1AQ92625 1134 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 ESR2Q92731 530 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 RILPL2Q969X0 211 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
CCDC57-218ENST00000583593 MYH6P13533 1939 aa15.78■□□□□ 0.12
CCDC57-218ENST00000583593 KCNQ1P51787 676 aa15.77■□□□□ 0.12
CCDC57-218ENST00000583593 SEPT14Q6ZU15 432 aa15.77■□□□□ 0.12
CCDC57-218ENST00000583593 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
CCDC57-218ENST00000583593 FTOQ9C0B1 505 aaKnown RBP eCLIP15.77■□□□□ 0.12
CCDC57-218ENST00000583593 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.12
CCDC57-218ENST00000583593 ABCB11O95342 1321 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 B4DLN1 442 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 ZNF213O14771 459 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 KDM4AO75164 1064 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 GH1P01241 217 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
CCDC57-218ENST00000583593 CHMP4BP1P59074 171 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 NSUN6Q8TEA1 469 aaKnown RBP15.76■□□□□ 0.11
CCDC57-218ENST00000583593 ARNTL2Q8WYA1 636 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 MAF1Q9H063 256 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 NOD1Q9Y239 953 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 MYH7BA7E2Y1 1941 aa15.76■□□□□ 0.11
CCDC57-218ENST00000583593 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms