RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 A0A1W2PQ27 194 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 A0A1W2PQ64 194 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 A0A1W2PQD8 194 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 GCFC2P16383 781 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 NCAPG2Q86XI2 1143 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CCAR1Q8IX12 1150 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PARK7Q99497 189 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 MOV10L1Q9BXT6 1211 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 TMEM60Q9H2L4 133 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FBXO40Q9UH90 709 aa15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-219ENST00000580670 LAD1O00515 517 aa15.71■□□□□ 0.11
CDK5RAP3-219ENST00000580670 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-219ENST00000580670 FERMT2Q96AC1 680 aa15.71■□□□□ 0.11
CDK5RAP3-219ENST00000580670 A1CFQ9NQ94 594 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-219ENST00000580670 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-219ENST00000580670 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SLC37A4O43826 429 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SLC25A27O95847 323 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP3A4P08684 503 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 COPB2P35606 906 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GCLCP48506 637 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ERVK-9P63128 1117 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ERVK-24P63145 666 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 UBXN2AP68543 259 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GRIN1Q05586 938 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 Q3C1V9 767 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ARL6IP4Q66PJ3 421 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MOXD1Q6UVY6 613 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MAF1Q9H063 256 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP3A7-CYP3A51PA0A087WV96 503 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 VWA3AA6NCI4 1184 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 IGF2BP3O00425 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 OR52Z1P0C646 297 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 LIG1P18858 919 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ERCC3P19447 782 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CMA1P23946 247 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP3A7P24462 503 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ZNF76P36508 570 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GRM1Q13255 1194 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ANKRD13CQ8N6S4 541 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GPRC5AQ8NFJ5 357 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MRPS27Q92552 414 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 GOLPH3LQ9H4A5 285 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 RRAGDQ9NQL2 400 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
CDK5RAP3-219ENST00000580670 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CIITAP33076 1130 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 INHBEP58166 350 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CALCRLQ16602 461 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SHC4Q6S5L8 630 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ANKRD35Q8N283 1001 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ZNF579Q8NAF0 562 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 UBE2Q2Q8WVN8 375 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 RMDN3Q96TC7 470 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ZCCHC17Q9NP64 241 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-219ENST00000580670 A0A1B0GVL5 298 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PRPHP41219 470 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SREBF2Q12772 1141 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 IL17AQ16552 155 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PRR16Q569H4 304 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CYP4F22Q6NT55 531 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 DTHD1Q6ZMT9 781 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MBOAT7Q96N66 472 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MTMR9Q96QG7 549 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PURBQ96QR8 312 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PFASO15067 1338 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FRMPD4Q14CM0 1322 aa15.68■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM86B1E9PN63 330 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM86B2P0C5J1 330 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 EIF2AK2P19525 551 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CCNA1P78396 465 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 ARHGEF16Q5VV41 709 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 IFNL1Q8IU54 200 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 R3HDMLQ9H3Y0 253 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MROH8Q9H579 483 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PXMP2Q9NR77 195 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 CREBZFQ9NS37 354 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 MARCH6O60337 910 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 NR1I2O75469 434 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 PFKFB1P16118 471 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 APLP1P51693 650 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 NDUFA8P51970 172 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 Q4G0T1 1027 aa15.67■□□□□ 0.1
CDK5RAP3-219ENST00000580670 WDR78Q5VTH9 848 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms