RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 RFXAPO00287 272 aa24.65■■□□□ 1.54
TSEN54-205ENST00000578415 KPNA6O60684 536 aa24.65■■□□□ 1.54
TSEN54-205ENST00000578415 TXNP10599 105 aaKnown RBP24.65■■□□□ 1.54
TSEN54-205ENST00000578415 MPHOSPH6Q99547 160 aaKnown RBP24.65■■□□□ 1.54
TSEN54-205ENST00000578415 SCN5AQ14524 2016 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 EPOPA6NHQ4 379 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 ARHGEF15O94989 841 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 ACTN1P12814 892 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 TFF2Q03403 129 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 PTPN11Q06124 597 aaPredicted RBP24.64■■□□□ 1.54
TSEN54-205ENST00000578415 TICAM2Q86XR7 235 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 SLC9A7Q96T83 725 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 TSPYL2Q9H2G4 693 aaPredicted RBP24.64■■□□□ 1.54
TSEN54-205ENST00000578415 CPVLQ9H3G5 476 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 MTCH2Q9Y6C9 303 aa24.64■■□□□ 1.54
TSEN54-205ENST00000578415 NCOR1O75376 2440 aa24.64■■□□□ 1.53
TSEN54-205ENST00000578415 CCDC171Q6TFL3 1326 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 GOLGA8HP0CJ92 632 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 PCP11498 1178 aaKnown RBP24.63■■□□□ 1.53
TSEN54-205ENST00000578415 BMP1P13497 986 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 POU3F3P20264 500 aaPredicted RBP24.63■■□□□ 1.53
TSEN54-205ENST00000578415 USH1GQ495M9 461 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 CCDC62Q6P9F0 684 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 MFSD6Q6ZSS7 791 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 RETREG2Q8NC44 543 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 RGS22Q8NE09 1264 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 IL27Q8NEV9 243 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 PHOSPHO2Q8TCD6 241 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 NECAB3Q96P71 396 aaPredicted RBP24.63■■□□□ 1.53
TSEN54-205ENST00000578415 CERS4Q9HA82 394 aa24.63■■□□□ 1.53
TSEN54-205ENST00000578415 NEDD4P46934 1319 aa24.62■■□□□ 1.53
TSEN54-205ENST00000578415 XIRP2A4UGR9 3374 aa24.62■■□□□ 1.53
TSEN54-205ENST00000578415 GPATCH4Q5T3I0 446 aaKnown RBP24.62■■□□□ 1.53
TSEN54-205ENST00000578415 CTAGE1Q96RT6 745 aa24.62■■□□□ 1.53
TSEN54-205ENST00000578415 UBA5Q9GZZ9 404 aa24.62■■□□□ 1.53
TSEN54-205ENST00000578415 RAPGEFL1Q9UHV5 662 aa24.62■■□□□ 1.53
TSEN54-205ENST00000578415 REV3LO60673 3130 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
TSEN54-205ENST00000578415 TAP1Q03518 808 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 HDAC1Q13547 482 aaPredicted RBP24.61■■□□□ 1.53
TSEN54-205ENST00000578415 HERC6Q8IVU3 1022 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 TBC1D5Q92609 795 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 ZKSCAN3Q9BRR0 538 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 FTOQ9C0B1 505 aaKnown RBP eCLIP24.61■■□□□ 1.53
TSEN54-205ENST00000578415 BDP1A6H8Y1 2624 aa24.61■■□□□ 1.53
TSEN54-205ENST00000578415 PRRC2BQ5JSZ5 2229 aaKnown RBP24.6■■□□□ 1.53
TSEN54-205ENST00000578415 B4DLN1 442 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 MRPL12P52815 198 aaKnown RBP24.6■■□□□ 1.53
TSEN54-205ENST00000578415 BFSP2Q13515 415 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 KRT40Q6A162 431 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 AFG1LQ8WV93 481 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 ESR2Q92731 530 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 CRBNQ96SW2 442 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 RNF41Q9H4P4 317 aaPredicted RBP24.6■■□□□ 1.53
TSEN54-205ENST00000578415 COL20A1Q9P218 1284 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 NOD1Q9Y239 953 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 TANC1Q9C0D5 1861 aa24.6■■□□□ 1.53
TSEN54-205ENST00000578415 MMP3P08254 477 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 CHMP4BP1P59074 171 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 GPNMBQ14956 572 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 SKIV2LQ15477 1246 aaKnown RBP24.59■■□□□ 1.53
TSEN54-205ENST00000578415 CDC37Q16543 378 aaPredicted RBP24.59■■□□□ 1.53
TSEN54-205ENST00000578415 PTGISQ16647 500 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 DGKHQ86XP1 1220 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 SYTL5Q8TDW5 730 aaPredicted RBP24.59■■□□□ 1.53
TSEN54-205ENST00000578415 TAAR1Q96RJ0 339 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 TRANK1O15050 2925 aa24.59■■□□□ 1.53
TSEN54-205ENST00000578415 GTPBP6O43824 516 aaPredicted RBP24.58■■□□□ 1.53
TSEN54-205ENST00000578415 KCNQ1P51787 676 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 ARHGAP1Q07960 439 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 LY6KQ17RY6 165 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 GDF6Q6KF10 455 aaPredicted RBP24.58■■□□□ 1.53
TSEN54-205ENST00000578415 SEPT14Q6ZU15 432 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 SPRED2Q7Z698 418 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 SESTD1Q86VW0 696 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 ARNTL2Q8WYA1 636 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 KAT2BQ92831 832 aa24.58■■□□□ 1.53
TSEN54-205ENST00000578415 TRIM6-TRIM34B2RNG4 842 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 BAIAP3O94812 1187 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 GH1P01241 217 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 PNMA1Q8ND90 353 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 CAGE1Q8TC20 777 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 MAF1Q9H063 256 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 ABCB11O95342 1321 aa24.57■■□□□ 1.52
TSEN54-205ENST00000578415 TET1Q8NFU7 2136 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 KIF28PB7ZC32 967 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 AAK1Q2M2I8 961 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 ADGRF4Q8IZF3 695 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 NSUN6Q8TEA1 469 aaKnown RBP24.56■■□□□ 1.52
TSEN54-205ENST00000578415 AFAP1L1Q8TED9 768 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 DHX38Q92620 1227 aaKnown RBP24.56■■□□□ 1.52
TSEN54-205ENST00000578415 RILPL2Q969X0 211 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 LNPKQ9C0E8 428 aa24.56■■□□□ 1.52
TSEN54-205ENST00000578415 KDM4AO75164 1064 aa24.55■■□□□ 1.52
TSEN54-205ENST00000578415 SDSP20132 328 aa24.55■■□□□ 1.52
TSEN54-205ENST00000578415 ANKS1AQ92625 1134 aa24.55■■□□□ 1.52
TSEN54-205ENST00000578415 ZNF213O14771 459 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 LPXNO60711 386 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 SELPP16109 830 aa24.54■■□□□ 1.52
TSEN54-205ENST00000578415 WDR5P61964 334 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms