RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 BADQ92934 168 aa11.79□□□□□ -0.52
SUPT6H-204ENST00000577939 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
SUPT6H-204ENST00000577939 LSG1Q9H089 658 aaKnown RBP11.79□□□□□ -0.52
SUPT6H-204ENST00000577939 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
SUPT6H-204ENST00000577939 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
SUPT6H-204ENST00000577939 SLC27A2O14975 620 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 CREB3L3Q68CJ9 461 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 STOX1Q6ZVD7 989 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 TMEM199Q8N511 208 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 CUL5Q93034 780 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
SUPT6H-204ENST00000577939 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TIMP1P01033 207 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 GH1P01241 217 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 SUPT20HL2P0C7V6 817 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 LIFRP42702 1097 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 HSD17B4P51659 736 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 GHRHRQ02643 423 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 FAAP100Q0VG06 881 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TROAPQ12815 778 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 PSRC1Q6PGN9 363 aaPredicted RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 CHST3Q7LGC8 479 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 RNPC3Q96LT9 517 aaKnown RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 LY9Q9HBG7 655 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 TRIP12Q14669 1992 aaPredicted RBP11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 MYO9BQ13459 2157 aa11.77□□□□□ -0.53
SUPT6H-204ENST00000577939 GBF1Q92538 1859 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 DOCK5Q9H7D0 1870 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 CTAGE5O15320 804 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 MYL3P08590 195 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 SMARCA1P28370 1054 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 CCND2P30279 289 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 CDK7P50613 346 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 ANTXR2P58335 489 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 FGD1P98174 961 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 GNPTABQ3T906 1256 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 MFSD5Q6N075 450 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 LRCH3Q96II8 777 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 PIGSQ96S52 555 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 KATNAL1Q9BW62 490 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
SUPT6H-204ENST00000577939 COL6A3P12111 3177 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 STAM2O75886 525 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 REC8O95072 547 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 NR3C2P08235 984 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 NECTIN1Q15223 517 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 FAM47CQ5HY64 1035 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 SEPT14Q6ZU15 432 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 DEFB123Q8N688 67 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 CCDC155Q8N6L0 562 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 SLC43A3Q8NBI5 491 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 TAAR1Q96RJ0 339 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 EHMT1Q9H9B1 1298 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
SUPT6H-204ENST00000577939 TMEM265A0A087WTH1 108 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 A6NJR5 290 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 PTPN11Q06124 597 aaPredicted RBP11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 DGKDQ16760 1214 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 TEX2Q8IWB9 1127 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 NEK1Q96PY6 1258 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
SUPT6H-204ENST00000577939 PPP1R12CQ9BZL4 782 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms