RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 TTC14Q96N46 770 aa23.31■■□□□ 1.32
SLC12A4-217ENST00000576462 UBA5Q9GZZ9 404 aa23.31■■□□□ 1.32
SLC12A4-217ENST00000576462 WDR19Q8NEZ3 1342 aa23.31■■□□□ 1.32
SLC12A4-217ENST00000576462 RFXAPO00287 272 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 CA3P07451 260 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 ACTN1P12814 892 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 DNERQ8NFT8 737 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 FTOQ9C0B1 505 aaKnown RBP eCLIP23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 TSPYL2Q9H2G4 693 aaPredicted RBP23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 NOD1Q9Y239 953 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
SLC12A4-217ENST00000576462 A6NJR5 290 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 KPNA6O60684 536 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 ARIH2O95376 493 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 SNHG28P0DPA3 235 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 SCN5AQ14524 2016 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 NFRKBQ6P4R8 1299 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 UHRF1Q96T88 793 aaPredicted RBP23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 NEDD4P46934 1319 aa23.29■■□□□ 1.32
SLC12A4-217ENST00000576462 B4DLN1 442 aa23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 IQCF3P0C7M6 154 aa23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 MRPL12P52815 198 aaKnown RBP23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 SKIV2LQ15477 1246 aaKnown RBP23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 ESR2Q92731 530 aa23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 RNF41Q9H4P4 317 aaPredicted RBP23.28■■□□□ 1.32
SLC12A4-217ENST00000576462 PCP11498 1178 aaKnown RBP23.27■■□□□ 1.32
SLC12A4-217ENST00000576462 RFC2P35250 354 aa23.27■■□□□ 1.32
SLC12A4-217ENST00000576462 HDAC1Q13547 482 aaPredicted RBP23.27■■□□□ 1.32
SLC12A4-217ENST00000576462 GPATCH4Q5T3I0 446 aaKnown RBP23.27■■□□□ 1.32
SLC12A4-217ENST00000576462 TBC1D5Q92609 795 aa23.27■■□□□ 1.32
SLC12A4-217ENST00000576462 XIRP2A4UGR9 3374 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 PITPNM1O00562 1244 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 ZNF213O14771 459 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 COL9A1P20849 921 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 TFF2Q03403 129 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 BFSP2Q13515 415 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 CDC37Q16543 378 aaPredicted RBP23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 SEPT14Q6ZU15 432 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 CHST3Q7LGC8 479 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 AFG1LQ8WV93 481 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 SLC9A7Q96T83 725 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 SCN10AQ9Y5Y9 1956 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 REV3LO60673 3130 aa23.26■■□□□ 1.31
SLC12A4-217ENST00000576462 SDSP20132 328 aa23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 PTPN11Q06124 597 aaPredicted RBP23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 PTGISQ16647 500 aa23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 LY6KQ17RY6 165 aa23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 NECAB3Q96P71 396 aaPredicted RBP23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 TAAR1Q96RJ0 339 aa23.25■■□□□ 1.31
SLC12A4-217ENST00000576462 EPOPA6NHQ4 379 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 GTPBP6O43824 516 aaPredicted RBP23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 KDM4AO75164 1064 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 MFAP1P55081 439 aaKnown RBP23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 CCDC62Q6P9F0 684 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 DGKHQ86XP1 1220 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 TICAM2Q86XR7 235 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 HERC6Q8IVU3 1022 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 PNMA1Q8ND90 353 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 RGS22Q8NE09 1264 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 ARNTL2Q8WYA1 636 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 KAT14Q9H8E8 782 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 COL20A1Q9P218 1284 aa23.24■■□□□ 1.31
SLC12A4-217ENST00000576462 DHX16O60231 1041 aaKnown RBP23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 ARHGEF15O94989 841 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 GH1P01241 217 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 MMP3P08254 477 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 KRT40Q6A162 431 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 IQCA1Q86XH1 822 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 PHOSPHO2Q8TCD6 241 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 SYTL5Q8TDW5 730 aaPredicted RBP23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 MTCH2Q9Y6C9 303 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 ABCB11O95342 1321 aa23.23■■□□□ 1.31
SLC12A4-217ENST00000576462 KIF28PB7ZC32 967 aa23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 ARHGAP1Q07960 439 aa23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 GDF6Q6KF10 455 aaPredicted RBP23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 NSUN6Q8TEA1 469 aaKnown RBP23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 VAT1LQ9HCJ6 419 aa23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 RAPGEFL1Q9UHV5 662 aa23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 TANC1Q9C0D5 1861 aa23.22■■□□□ 1.31
SLC12A4-217ENST00000576462 B4E1Z4 1266 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 KCNJ6P48051 423 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 KCNQ1P51787 676 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 TAP1Q03518 808 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 STXBP2Q15833 593 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 CWC27Q6UX04 472 aaKnown RBP23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 CCDC155Q8N6L0 562 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 RMDN3Q96TC7 470 aa23.21■■□□□ 1.31
SLC12A4-217ENST00000576462 BMP1P13497 986 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 EIF2AK2P19525 551 aaKnown RBP23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 QRICH1Q2TAL8 776 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 ARHGEF16Q5VV41 709 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 AFAP1L1Q8TED9 768 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 KAT2BQ92831 832 aa23.2■■□□□ 1.3
SLC12A4-217ENST00000576462 ZSCAN10Q96SZ4 725 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms