RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 TAAR1Q96RJ0 339 aa18.03■□□□□ 0.48
CCNE1-204ENST00000574121 PXMP2Q9NR77 195 aa18.03■□□□□ 0.48
CCNE1-204ENST00000574121 BIN2Q9UBW5 565 aaPredicted RBP18.03■□□□□ 0.48
CCNE1-204ENST00000574121 CNPY2Q9Y2B0 182 aa18.03■□□□□ 0.48
CCNE1-204ENST00000574121 FRMPD4Q14CM0 1322 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 SPDYE3A6NKU9 549 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 CLK2P49760 499 aaKnown RBP18.02■□□□□ 0.48
CCNE1-204ENST00000574121 ARHGEF16Q5VV41 709 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 ARMCX2Q7L311 632 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 FCHSD1Q86WN1 690 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
CCNE1-204ENST00000574121 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 SH3TC2Q8TF17 1288 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 ZNF333Q96JL9 665 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 AIFM3Q96NN9 605 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 PURBQ96QR8 312 aaKnown RBP18.02■□□□□ 0.48
CCNE1-204ENST00000574121 PHF20Q9BVI0 1012 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 ABHD16BQ9H3Z7 469 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 EHMT1Q9H9B1 1298 aa18.02■□□□□ 0.48
CCNE1-204ENST00000574121 RPTORQ8N122 1335 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 PRKAR2AP13861 404 aaKnown RBP18.01■□□□□ 0.47
CCNE1-204ENST00000574121 CYP2C19P33261 490 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 TRIM29Q14134 588 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 XRRA1Q6P2D8 792 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 PDCD2LQ9BRP1 358 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.01■□□□□ 0.47
CCNE1-204ENST00000574121 PCDHA4Q9UN74 947 aa18.01■□□□□ 0.47
CCNE1-204ENST00000574121 ZNFX1Q9P2E3 1918 aaKnown RBP18.01■□□□□ 0.47
CCNE1-204ENST00000574121 SNAI1O95863 264 aaPredicted RBP18■□□□□ 0.47
CCNE1-204ENST00000574121 CYBAP13498 195 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 CACNB2Q08289 660 aaPredicted RBP18■□□□□ 0.47
CCNE1-204ENST00000574121 PDE4DQ08499 809 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 UBE2SQ16763 222 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 HMX1Q9NP08 348 aaPredicted RBP18■□□□□ 0.47
CCNE1-204ENST00000574121 PCDHA6Q9UN73 950 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 PCDHA8Q9Y5H6 950 aa18■□□□□ 0.47
CCNE1-204ENST00000574121 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 STAM2O75886 525 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 NR3C2P08235 984 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 EIF2AK2P19525 551 aaKnown RBP17.99■□□□□ 0.47
CCNE1-204ENST00000574121 PGM5Q15124 567 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 NPY5RQ15761 445 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 STXBP2Q15833 593 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 C8orf76Q96K31 380 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 BRMS1Q9HCU9 246 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 VTA1Q9NP79 307 aa17.99■□□□□ 0.47
CCNE1-204ENST00000574121 EIF3JO75822 258 aaKnown RBP17.98■□□□□ 0.47
CCNE1-204ENST00000574121 MMP1P03956 469 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 CCND2P30279 289 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 TRIM32Q13049 653 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 ACVR2BQ13705 512 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 PCNX4Q63HM2 1172 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 VSIG10LQ86VR7 867 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 KCNJ14Q9UNX9 436 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 LCTP09848 1927 aa17.98■□□□□ 0.47
CCNE1-204ENST00000574121 M0R2N6 131 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 MSCO60682 206 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 DTNBO60941 627 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
CCNE1-204ENST00000574121 GJB2P29033 226 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 SREBF1P36956 1147 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 KRT40Q6A162 431 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 FBXO18Q8NFZ0 1043 aa17.97■□□□□ 0.47
CCNE1-204ENST00000574121 SEPT4O43236 478 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 CCL5P13501 91 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 CAPN2P17655 700 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCNE1-204ENST00000574121 JAKMIP3Q5VZ66 844 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 KRT25Q7Z3Z0 450 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 TNS4Q8IZW8 715 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 PAK6Q9NQU5 681 aaPredicted RBP17.96■□□□□ 0.47
CCNE1-204ENST00000574121 GJB4Q9NTQ9 266 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 TMEM260Q9NX78 707 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.47
CCNE1-204ENST00000574121 RBM47A0AV96 593 aaKnown RBP17.95■□□□□ 0.46
CCNE1-204ENST00000574121 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
CCNE1-204ENST00000574121 AKR1A1P14550 325 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 PDCP20941 246 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 KRT2P35908 639 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 BECN1Q14457 450 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 TRPV1Q8NER1 839 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 CRYGNQ8WXF5 182 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 ABHD8Q96I13 439 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
CCNE1-204ENST00000574121 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCNE1-204ENST00000574121 UNC93B1Q9H1C4 597 aa17.95■□□□□ 0.46
CCNE1-204ENST00000574121 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
CCNE1-204ENST00000574121 HSP90AA1P07900 732 aaKnown RBP17.94■□□□□ 0.46
CCNE1-204ENST00000574121 GJB1P08034 283 aa17.94■□□□□ 0.46
CCNE1-204ENST00000574121 CYP3A4P08684 503 aa17.94■□□□□ 0.46
CCNE1-204ENST00000574121 CCND3P30281 292 aaPredicted RBP17.94■□□□□ 0.46
CCNE1-204ENST00000574121 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
CCNE1-204ENST00000574121 MTFR1Q15390 333 aa17.94■□□□□ 0.46
CCNE1-204ENST00000574121 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms