RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
SMG6-210ENST00000572205 CHD7Q9P2D1 2997 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 RGS20O76081 388 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 ARIH2O95376 493 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 SEC24BO95487 1268 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
SMG6-210ENST00000572205 CDC27P30260 824 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 ACVR2BQ13705 512 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 TOB2Q14106 344 aaPredicted RBP10.1□□□□□ -0.79
SMG6-210ENST00000572205 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
SMG6-210ENST00000572205 CCDC144BQ3MJ40 725 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 GJC2Q5T442 439 aaPredicted RBP10.1□□□□□ -0.79
SMG6-210ENST00000572205 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
SMG6-210ENST00000572205 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 MAF1Q9H063 256 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 ABHD16BQ9H3Z7 469 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 C11orf49Q9H6J7 331 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 SLC5A4Q9NY91 659 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 TRPC6Q9Y210 931 aa10.1□□□□□ -0.79
SMG6-210ENST00000572205 GBF1Q92538 1859 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 H0YGN5 161 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 PGK1P00558 417 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 SMPD1P17405 629 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 RPS6KB1P23443 525 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 SMARCA1P28370 1054 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 ADCYAP1R1P41586 468 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 RCAN1P53805 252 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 GJA9P57773 515 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
SMG6-210ENST00000572205 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 CASC1Q6TDU7 716 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 RNF207Q6ZRF8 634 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 NECAB2Q7Z6G3 386 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 CATIPQ7Z7H3 387 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 FBXO11Q86XK2 927 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
SMG6-210ENST00000572205 TAAR1Q96RJ0 339 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 XPNPEP3Q9NQH7 507 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 ZHX1Q9UKY1 873 aaPredicted RBP10.09□□□□□ -0.79
SMG6-210ENST00000572205 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
SMG6-210ENST00000572205 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
SMG6-210ENST00000572205 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 PTPDC1A2A3K4 754 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 MEIS2O14770 477 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 DUSP11O75319 330 aaKnown RBP10.08□□□□□ -0.8
SMG6-210ENST00000572205 REC8O95072 547 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 CALML3P27482 149 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 CNGA1P29973 690 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 KRT32Q14532 448 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 NTRK3Q16288 839 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 CCDC62Q6P9F0 684 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 DNERQ8NFT8 737 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 NUP133Q8WUM0 1156 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 VTA1Q9NP79 307 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 PNMA2Q9UL42 364 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
SMG6-210ENST00000572205 COL6A3P12111 3177 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 TRANK1O15050 2925 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 REV3LO60673 3130 aa10.08□□□□□ -0.8
SMG6-210ENST00000572205 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SMG6-210ENST00000572205 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 hCG_1642624A0A1W2PR95 340 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 ERICH2A1L162 156 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 ASB14A6NK59 587 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 RARBP10826 455 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 Q6ZUG5 572 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 FANCBQ8NB91 859 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 PDCD2LQ9BRP1 358 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 PXMP2Q9NR77 195 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
SMG6-210ENST00000572205 KLF18A0A0U1RQI7 1052 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
SMG6-210ENST00000572205 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
SMG6-210ENST00000572205 MRPS9P82933 396 aaKnown RBP10.06□□□□□ -0.8
SMG6-210ENST00000572205 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 PKN1Q16512 942 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 WWC2Q6AWC2 1192 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
SMG6-210ENST00000572205 TLK2Q86UE8 772 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms