RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
CIITA-205ENST00000571186 AAK1Q2M2I8 961 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 MYH7BA7E2Y1 1941 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 MYH6P13533 1939 aa16.84■□□□□ 0.29
CIITA-205ENST00000571186 KPNA6O60684 536 aa16.83■□□□□ 0.28
CIITA-205ENST00000571186 BMP1P13497 986 aa16.83■□□□□ 0.28
CIITA-205ENST00000571186 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
CIITA-205ENST00000571186 CLEC4DQ8WXI8 215 aa16.83■□□□□ 0.28
CIITA-205ENST00000571186 RAD50Q92878 1312 aa16.83■□□□□ 0.28
CIITA-205ENST00000571186 MPHOSPH6Q99547 160 aaKnown RBP16.83■□□□□ 0.28
CIITA-205ENST00000571186 NKRFO15226 690 aaKnown RBP eCLIP16.82■□□□□ 0.28
CIITA-205ENST00000571186 IQCF3P0C7M6 154 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 RFC2P35250 354 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 ALX1Q15699 326 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 NFRKBQ6P4R8 1299 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 COPS5Q92905 334 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 EVI5LQ96CN4 794 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 NOD1Q9Y239 953 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 BRWD1Q9NSI6 2320 aa16.82■□□□□ 0.28
CIITA-205ENST00000571186 KIAA1217Q5T5P2 1943 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 B4DLN1 442 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 KIF28PB7ZC32 967 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 FGAP02671 866 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 FGRP09769 529 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 TXNP10599 105 aaKnown RBP16.81■□□□□ 0.28
CIITA-205ENST00000571186 KCNQ1P51787 676 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
CIITA-205ENST00000571186 RPS6P62753 249 aaKnown RBP16.81■□□□□ 0.28
CIITA-205ENST00000571186 BFSP2Q13515 415 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 PHOSPHO2Q8TCD6 241 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 ARNTL2Q8WYA1 636 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 SLC9A7Q96T83 725 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 TANC1Q9C0D5 1861 aa16.81■□□□□ 0.28
CIITA-205ENST00000571186 A6NJR5 290 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 PITPNM1O00562 1244 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 PDHBP11177 359 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 POU3F3P20264 500 aaPredicted RBP16.8■□□□□ 0.28
CIITA-205ENST00000571186 KRT40Q6A162 431 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 OSBPL3Q9H4L5 887 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 TCP11L1Q9NUJ3 509 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 PTPRSQ13332 1948 aa16.8■□□□□ 0.28
CIITA-205ENST00000571186 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 EDNRBP24530 442 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 HAND2P61296 217 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 TAP1Q03518 808 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
CIITA-205ENST00000571186 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
CIITA-205ENST00000571186 PTGISQ16647 500 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 USH1GQ495M9 461 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 MCMDC2Q4G0Z9 681 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 TTC14Q96N46 770 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 C1QTNF1Q9BXJ1 281 aa16.78■□□□□ 0.28
CIITA-205ENST00000571186 TLL1O43897 1013 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 ARHGEF15O94989 841 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 ARIH2O95376 493 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
CIITA-205ENST00000571186 KCNJ6P48051 423 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 MFSD6Q6ZSS7 791 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 CCDC155Q8N6L0 562 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 AFG1LQ8WV93 481 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 COG5Q9UP83 839 aa16.77■□□□□ 0.28
CIITA-205ENST00000571186 WDR19Q8NEZ3 1342 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 BAIAP3O94812 1187 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
CIITA-205ENST00000571186 LY6KQ17RY6 165 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 SEPT14Q6ZU15 432 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 FAM122AQ96E09 287 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
CIITA-205ENST00000571186 GH1P01241 217 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
CIITA-205ENST00000571186 GRB10Q13322 594 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
CIITA-205ENST00000571186 GDF6Q6KF10 455 aaPredicted RBP16.75■□□□□ 0.27
CIITA-205ENST00000571186 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 AFAP1L1Q8TED9 768 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 HLA-CQ95604 372 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 TAAR1Q96RJ0 339 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
CIITA-205ENST00000571186 MMP3P08254 477 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms