RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MTMR10Q9NXD2 777 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 COL20A1Q9P218 1284 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 A6NJR5 290 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 DHX16O60231 1041 aaKnown RBP19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 KPNA6O60684 536 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PURAQ00577 322 aaKnown RBP19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TTLL4Q14679 1199 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 SLC35G1Q2M3R5 365 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 CCDC62Q6P9F0 684 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TBC1D5Q92609 795 aa19.87■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PPP1R11O60927 126 aaPredicted RBP19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PTGS1P23219 599 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 SMARCA1P28370 1054 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 EPHB4P54760 987 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PPIGQ13427 754 aaKnown RBP eCLIP19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 BRDTQ58F21 947 aaPredicted RBP19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TAAR1Q96RJ0 339 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 RMDN3Q96TC7 470 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 SENP2Q9HC62 589 aa19.86■□□□□ 0.77
MAP1LC3B-208ENST00000570189 MYH7BA7E2Y1 1941 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 CYTH3O43739 400 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 NECTIN1Q15223 517 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 STXBP2Q15833 593 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMEM67Q5HYA8 995 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 CATIPQ7Z7H3 387 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 OR6J1Q8NGC5 347 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 LY9Q9HBG7 655 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 VAT1LQ9HCJ6 419 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PCDHA1Q9Y5I3 950 aa19.85■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMEM265A0A087WTH1 108 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 DDAH1O94760 285 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TXNP10599 105 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 RASIP1Q5U651 963 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMTC2Q8N394 836 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMEM199Q8N511 208 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 EMID1Q96A84 441 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMEM87BQ96K49 555 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 MTG1Q9BT17 334 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 SPZ1Q9BXG8 430 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PXMP2Q9NR77 195 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 STXBP5LQ9Y2K9 1186 aa19.84■□□□□ 0.77
MAP1LC3B-208ENST00000570189 EIF3JO75822 258 aaKnown RBP19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 ARIH2O95376 493 aa19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 LIFRP42702 1097 aa19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PTPN11Q06124 597 aaPredicted RBP19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 NFRKBQ6P4R8 1299 aa19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 Q7L0L9 218 aa19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 RNPC3Q96LT9 517 aaKnown RBP19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 ALDH8A1Q9H2A2 487 aaPredicted RBP19.83■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TANC1Q9C0D5 1861 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SLC27A2O14975 620 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 B4GALT4O60513 344 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CFBP00751 764 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 NR3C2P08235 984 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 MCM5P33992 734 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 ARHGEF16Q5VV41 709 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PSRC1Q6PGN9 363 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CHST3Q7LGC8 479 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PIGSQ96S52 555 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 LZTS2Q9BRK4 669 aa19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 NOC4LQ9BVI4 516 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3B-208ENST00000570189 FRMPD4Q14CM0 1322 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SUPT20HL2P0C7V6 817 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 KIF5BP33176 963 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PSMC6P62333 389 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 ARHGAP1Q07960 439 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CREB3L3Q68CJ9 461 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 KCNV1Q6PIU1 500 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CASC1Q6TDU7 716 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 C16orf59Q7L2K0 433 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PDCD2LQ9BRP1 358 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HIPK3Q9H422 1215 aa19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GPHNQ9NQX3 736 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PRC1O43663 620 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GH1P01241 217 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CSF2RAP15509 400 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 TMEM240Q5SV17 173 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SGMS1Q86VZ5 419 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 COPS5Q92905 334 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 IL23AQ9NPF7 189 aa19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3B-208ENST00000570189 MYL3P08590 195 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CALM1P0DP23 149 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CALM2P0DP24 149 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CALM3P0DP25 149 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HOXD8P13378 290 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 EIF2AK2P19525 551 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GNAQP50148 359 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PGM5Q15124 567 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 VSIG10LQ86VR7 867 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SESTD1Q86VW0 696 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HOMER1Q86YM7 354 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CTCFLQ8NI51 663 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GUCD1Q96NT3 240 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms