RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 PDGFCQ9NRA1 345 aa12□□□□□ -0.49
UBR1-207ENST00000568782 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
UBR1-207ENST00000568782 GNEQ9Y223 722 aaKnown RBP12□□□□□ -0.49
UBR1-207ENST00000568782 ARVCFO00192 962 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 SH2B2O14492 632 aaPredicted RBP11.99□□□□□ -0.49
UBR1-207ENST00000568782 EIF3JO75822 258 aaKnown RBP11.99□□□□□ -0.49
UBR1-207ENST00000568782 FXR1P51114 621 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBR1-207ENST00000568782 ANTXR2P58335 489 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 NKX3-2P78367 333 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 SEPT14Q6ZU15 432 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 DHX32Q7L7V1 743 aaKnown RBP11.99□□□□□ -0.49
UBR1-207ENST00000568782 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 SPZ1Q9BXG8 430 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
UBR1-207ENST00000568782 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 LRRC37A2A6NM11 1700 aa11.99□□□□□ -0.49
UBR1-207ENST00000568782 ASTN1O14525 1302 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 MYADML2A6NDP7 307 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 ADCY6O43306 1168 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 MYL3P08590 195 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 MYCLP12524 364 aaPredicted RBP11.98□□□□□ -0.49
UBR1-207ENST00000568782 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
UBR1-207ENST00000568782 EDNRBP24530 442 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 PSMA5P28066 241 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 ITGA7Q13683 1181 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 CCSAPQ6IQ19 270 aaPredicted RBP11.98□□□□□ -0.49
UBR1-207ENST00000568782 CXCL17Q6UXB2 119 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 FANCBQ8NB91 859 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 SMARCC2Q8TAQ2 1214 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 TBC1D5Q92609 795 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 PRO3102Q9H379 93 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
UBR1-207ENST00000568782 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
UBR1-207ENST00000568782 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 RBM47A0AV96 593 aaKnown RBP11.97□□□□□ -0.49
UBR1-207ENST00000568782 EIF5BO60841 1220 aaKnown RBP11.97□□□□□ -0.49
UBR1-207ENST00000568782 GH1P01241 217 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 NR3C2P08235 984 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 CCND2P30279 289 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 HSD17B4P51659 736 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 BADQ92934 168 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 MTG1Q9BT17 334 aaPredicted RBP11.97□□□□□ -0.49
UBR1-207ENST00000568782 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 LRRC2Q9BYS8 371 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 MRVI1Q9Y6F6 885 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
UBR1-207ENST00000568782 TRIOBPQ9H2D6 2365 aa11.97□□□□□ -0.49
UBR1-207ENST00000568782 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 ZBTB43O43298 467 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 CYTH3O43739 400 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.49
UBR1-207ENST00000568782 FAAP100Q0VG06 881 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
UBR1-207ENST00000568782 LTBP2Q14767 1821 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 TRIM43BA6NCK2 446 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 EPB41L2O43491 1005 aaKnown RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 STAM2O75886 525 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 TIMP1P01033 207 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 TGFB3P10600 412 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 RXRAP19793 462 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 CDK7P50613 346 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 FPGSQ05932 587 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 LAMC2Q13753 1193 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 PGM5Q15124 567 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 RTN1Q16799 776 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 LRIT3Q3SXY7 679 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 TRIM43Q96BQ3 446 aaPredicted RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
UBR1-207ENST00000568782 PDCD2LQ9BRP1 358 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
UBR1-207ENST00000568782 A6NJR5 290 aa11.94□□□□□ -0.5
UBR1-207ENST00000568782 SPDYE3A6NKU9 549 aa11.94□□□□□ -0.5
UBR1-207ENST00000568782 CTAGE5O15320 804 aa11.94□□□□□ -0.5
UBR1-207ENST00000568782 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
UBR1-207ENST00000568782 AKAP17AQ02040 695 aaKnown RBP11.94□□□□□ -0.5
UBR1-207ENST00000568782 GHRHRQ02643 423 aa11.94□□□□□ -0.5
UBR1-207ENST00000568782 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms