RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
PKM-221ENST00000568743 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 FAM184AQ8NB25 1140 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 CCDC148Q8NFR7 591 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 NSUN6Q8TEA1 469 aaKnown RBP11.61□□□□□ -0.55
PKM-221ENST00000568743 WASF1Q92558 559 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
PKM-221ENST00000568743 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
PKM-221ENST00000568743 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
PKM-221ENST00000568743 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
PKM-221ENST00000568743 RBBP6Q7Z6E9 1792 aaKnown RBP11.6□□□□□ -0.55
PKM-221ENST00000568743 GJB2P29033 226 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 PDE4DQ08499 809 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 NPY5RQ15761 445 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 MAMDC4Q6UXC1 1216 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 TRPV1Q8NER1 839 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 DNERQ8NFT8 737 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 PDCD2LQ9BRP1 358 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 PHF20Q9BVI0 1012 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 MAF1Q9H063 256 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 MAP3K20Q9NYL2 800 aaKnown RBP11.6□□□□□ -0.55
PKM-221ENST00000568743 PCDHA6Q9UN73 950 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 PCDHA8Q9Y5H6 950 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
PKM-221ENST00000568743 SYNGAP1Q96PV0 1343 aa11.6□□□□□ -0.55
PKM-221ENST00000568743 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 NR3C2P08235 984 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 MYCLP12524 364 aaPredicted RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 CYBAP13498 195 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 CCL5P13501 91 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 XBP1P17861 261 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 EDNRBP24530 442 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 CNGA1P29973 690 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 GNA11P29992 359 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 CCND3P30281 292 aaPredicted RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 CLK2P49760 499 aaKnown RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 TRIM29Q14134 588 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 PGM5Q15124 567 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 MAP3K21Q5TCX8 1036 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 KRT40Q6A162 431 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 FBXO16Q8IX29 292 aaPredicted RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 TNS4Q8IZW8 715 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 BLIDQ8IZY5 108 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 REXO1Q8N1G1 1221 aaKnown RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 MSL3Q8N5Y2 521 aaKnown RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ARMC5Q96C12 935 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ZNF333Q96JL9 665 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 C8orf76Q96K31 380 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ANO3Q9BYT9 981 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 GLT8D2Q9H1C3 349 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 PCDHA4Q9UN74 947 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
PKM-221ENST00000568743 CENPFP49454 3210 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 PLXNA1Q9UIW2 1896 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 RPTORQ8N122 1335 aa11.59□□□□□ -0.55
PKM-221ENST00000568743 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
PKM-221ENST00000568743 ACVR2BQ13705 512 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 ANO1Q5XXA6 986 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 SPRYD3Q8NCJ5 442 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 MORC4Q8TE76 937 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 LENG1Q96BZ8 264 aaPredicted RBP11.58□□□□□ -0.56
PKM-221ENST00000568743 KATNBL1Q9H079 304 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 PDGFCQ9NRA1 345 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 FRMPD4Q14CM0 1322 aa11.58□□□□□ -0.56
PKM-221ENST00000568743 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.57□□□□□ -0.56
PKM-221ENST00000568743 M0R2N6 131 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 FOSP01100 380 aaPredicted RBP11.57□□□□□ -0.56
PKM-221ENST00000568743 MMP1P03956 469 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 PTGS1P23219 599 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 CCND2P30279 289 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 NR5A1Q13285 461 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 AP3B2Q13367 1082 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 STXBP2Q15833 593 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 VSIG10LQ86VR7 867 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 DAGLBQ8NCG7 672 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 IWS1Q96ST2 819 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
PKM-221ENST00000568743 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
PKM-221ENST00000568743 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 ABHD16BQ9H3Z7 469 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 EHMT1Q9H9B1 1298 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
PKM-221ENST00000568743 RTEL1Q9NZ71 1219 aa11.57□□□□□ -0.56
PKM-221ENST00000568743 LOC102724159A0A0B4J2E5 919 aa11.56□□□□□ -0.56
PKM-221ENST00000568743 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
PKM-221ENST00000568743 BTBD18B2RXH4 712 aa11.56□□□□□ -0.56
PKM-221ENST00000568743 B4DLN1 442 aa11.56□□□□□ -0.56
PKM-221ENST00000568743 ADCY6O43306 1168 aa11.56□□□□□ -0.56
PKM-221ENST00000568743 HSP90AA1P07900 732 aaKnown RBP11.56□□□□□ -0.56
PKM-221ENST00000568743 KRT2P35908 639 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms