RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	UBE2S	Q16763	222 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	ZNF792	Q3KQV3	632 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	FCHSD1	Q86WN1	690 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	TBC1D5	Q92609	795 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	RMDN3	Q96TC7	470 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	ANO3	Q9BYT9	981 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	COL20A1	Q9P218	1284 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	GJD2	Q9UKL4	321 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	LRRC37A2	A6NM11	1700 aa		13.73	□□□□□ -0.21
FANCA-231	ENST00000568626	RPTOR	Q8N122	1335 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	VPS37C	A5D8V6	355 aa	Predicted RBP	13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	ASB14	A6NK59	587 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	STX6	O43752	255 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	COBL	O75128	1261 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	FLT3LG	P49771	235 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	ALDH5A1	P51649	535 aa	Predicted RBP	13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	GUCY1B3	Q02153	619 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	PRKCZ	Q05513	592 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	XRRA1	Q6P2D8	792 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	SPRYD3	Q8NCJ5	442 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	IPO9	Q96P70	1041 aa	Known RBP	13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	IWS1	Q96ST2	819 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	PXMP2	Q9NR77	195 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	BIN2	Q9UBW5	565 aa	Predicted RBP	13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	PCDHA6	Q9UN73	950 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	TRIM17	Q9Y577	477 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	PCDHA8	Q9Y5H6	950 aa		13.72	□□□□□ -0.21
FANCA-231	ENST00000568626	DOCK3	Q8IZD9	2030 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	SYNGAP1	Q96PV0	1343 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	ECM2	O94769	699 aa	Predicted RBP	13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	SREBF1	P36956	1147 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	CNTN2	Q02246	1040 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	NONO	Q15233	471 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	ARHGEF16	Q5VV41	709 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	JAKMIP3	Q5VZ66	844 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	OLFML2B	Q68BL8	750 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	MAMDC4	Q6UXC1	1216 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	OTOP1	Q7RTM1	612 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	TNFRSF25	Q93038	417 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	MAML3	Q96JK9	1138 aa		13.71	□□□□□ -0.21
FANCA-231	ENST00000568626	SOWAHB	A6NEL2	793 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	BTBD18	B2RXH4	712 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	STAM2	O75886	525 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	CYP2B6	P20813	491 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	EDNRB	P24530	442 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	U2AF2	P26368	475 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	CCND2	P30279	289 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	CAP1	Q01518	475 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	NR5A1	Q13285	461 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	PCNX4	Q63HM2	1172 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	MCTP1	Q6DN14	999 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	BRAP	Q7Z569	592 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	CTU1	Q7Z7A3	348 aa	Known RBP	13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	NOSTRIN	Q8IVI9	506 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	SLAIN1	Q8ND83	568 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	RAET1E	Q8TD07	263 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	RASGRP4	Q8TDF6	673 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	OXER1	Q8TDS5	423 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	MORC4	Q8TE76	937 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	PXYLP1	Q8TE99	480 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	FGD4	Q96M96	766 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	TAAR1	Q96RJ0	339 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	NAP1L4	Q99733	375 aa	Known RBP	13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	PDCD2L	Q9BRP1	358 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	TINF2	Q9BSI4	451 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	TMEM260	Q9NX78	707 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	GABRQ	Q9UN88	632 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	MTMR6	Q9Y217	621 aa		13.7	□□□□□ -0.22
FANCA-231	ENST00000568626	ASTN1	O14525	1302 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	EIF2AK2	P19525	551 aa	Known RBP	13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	TRAPPC10	P48553	1259 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	ARHGAP4	P98171	946 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	MLLT1	Q03111	559 aa	Predicted RBP	13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	PDE4D	Q08499	809 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	PGM5	Q15124	567 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	PKN2	Q16513	984 aa	Known RBP	13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	PIK3AP1	Q6ZUJ8	805 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	NPLOC4	Q8TAT6	608 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	NRBP1	Q9UHY1	535 aa		13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	NOL7	Q9UMY1	257 aa	Known RBP	13.69	□□□□□ -0.22
FANCA-231	ENST00000568626	EIF3J	O75822	258 aa	Known RBP	13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	HMGCR	P04035	888 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	NR3C2	P08235	984 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	CYP3A4	P08684	503 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	RGS19	P49795	217 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	USP11	P51784	963 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	NUCB2	P80303	420 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	STXBP2	Q15833	593 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	MFSD14C	Q5VZR4	134 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	MOXD1	Q6UVY6	613 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	ARMCX2	Q7L311	632 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	VSIG10L	Q86VR7	867 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	TBCK	Q8TEA7	893 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	CRYGN	Q8WXF5	182 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	PGBD1	Q96JS3	809 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	PURB	Q96QR8	312 aa	Known RBP	13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	VTA1	Q9NP79	307 aa		13.68	□□□□□ -0.22
FANCA-231	ENST00000568626	MYH7B	A7E2Y1	1941 aa		13.67	□□□□□ -0.22

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