RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 BRWD1Q9NSI6 2320 aa18.25■□□□□ 0.51
PALB2-205ENST00000567003 ARIH2O95376 493 aa18.25■□□□□ 0.51
PALB2-205ENST00000567003 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
PALB2-205ENST00000567003 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
PALB2-205ENST00000567003 ACTN1P12814 892 aa18.25■□□□□ 0.51
PALB2-205ENST00000567003 TAP1Q03518 808 aa18.25■□□□□ 0.51
PALB2-205ENST00000567003 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.51
PALB2-205ENST00000567003 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 GTPBP6O43824 516 aaPredicted RBP18.24■□□□□ 0.51
PALB2-205ENST00000567003 PDHBP11177 359 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 HAND2P61296 217 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
PALB2-205ENST00000567003 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
PALB2-205ENST00000567003 HERC6Q8IVU3 1022 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 FAM227BQ96M60 508 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 SLC9A7Q96T83 725 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
PALB2-205ENST00000567003 A0A0D9SFI3 127 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 FGRP09769 529 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 EDNRBP24530 442 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 SCFD2Q8WU76 684 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
PALB2-205ENST00000567003 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 A6NJR5 290 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 PITPNM1O00562 1244 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 FGAP02671 866 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 TXNP10599 105 aaKnown RBP18.22■□□□□ 0.51
PALB2-205ENST00000567003 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
PALB2-205ENST00000567003 RFC2P35250 354 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 PLA2G5P39877 138 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 GRB10Q13322 594 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 USH1GQ495M9 461 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 BRDTQ58F21 947 aaPredicted RBP18.22■□□□□ 0.51
PALB2-205ENST00000567003 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 RAD50Q92878 1312 aa18.22■□□□□ 0.51
PALB2-205ENST00000567003 LOC102724159A0A0B4J2E5 919 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 NKRFO15226 690 aaKnown RBP eCLIP18.21■□□□□ 0.51
PALB2-205ENST00000567003 GOLGA8HP0CJ92 632 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 PWP2Q15269 919 aaKnown RBP18.21■□□□□ 0.51
PALB2-205ENST00000567003 ALX1Q15699 326 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
PALB2-205ENST00000567003 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 CTAGE1Q96RT6 745 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
PALB2-205ENST00000567003 BFSP2Q13515 415 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 GPNMBQ14956 572 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 PTGISQ16647 500 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 AAK1Q2M2I8 961 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 GDF6Q6KF10 455 aaPredicted RBP18.2■□□□□ 0.5
PALB2-205ENST00000567003 TBC1D10CQ8IV04 446 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 PHOSPHO2Q8TCD6 241 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 AFG1LQ8WV93 481 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
PALB2-205ENST00000567003 FAM122AQ96E09 287 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 HELLSQ9NRZ9 838 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 TCP11L1Q9NUJ3 509 aa18.2■□□□□ 0.5
PALB2-205ENST00000567003 TLL1O43897 1013 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 KPNA6O60684 536 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 LPXNO60711 386 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 MMP3P08254 477 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 WDR5P61964 334 aaKnown RBP18.19■□□□□ 0.5
PALB2-205ENST00000567003 DEFB103AP81534 67 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 PTPN11Q06124 597 aaPredicted RBP18.19■□□□□ 0.5
PALB2-205ENST00000567003 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 CHST3Q7LGC8 479 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 DNERQ8NFT8 737 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 ZKSCAN3Q9BRR0 538 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 UBA5Q9GZZ9 404 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
PALB2-205ENST00000567003 KIF28PB7ZC32 967 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
PALB2-205ENST00000567003 KCNJ6P48051 423 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 ARHGAP1Q07960 439 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
PALB2-205ENST00000567003 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 CCDC62Q6P9F0 684 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 KAT2BQ92831 832 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 KHSRPQ92945 711 aaKnown RBP eCLIP18.18■□□□□ 0.5
PALB2-205ENST00000567003 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 MPHOSPH6Q99547 160 aaKnown RBP18.18■□□□□ 0.5
PALB2-205ENST00000567003 C1QTNF1Q9BXJ1 281 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 MTUS1Q9ULD2 1270 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 NEDD4P46934 1319 aa18.18■□□□□ 0.5
PALB2-205ENST00000567003 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
PALB2-205ENST00000567003 BAIAP3O94812 1187 aa18.17■□□□□ 0.5
PALB2-205ENST00000567003 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
PALB2-205ENST00000567003 HLA-CQ95604 372 aa18.17■□□□□ 0.5
PALB2-205ENST00000567003 COG5Q9UP83 839 aa18.17■□□□□ 0.5
PALB2-205ENST00000567003 GH1P01241 217 aa18.16■□□□□ 0.5
PALB2-205ENST00000567003 PDE1AP54750 535 aa18.16■□□□□ 0.5
PALB2-205ENST00000567003 CDC37Q16543 378 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms