RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 INF2Q27J81 1249 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 LETM2Q2VYF4 491 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 PPP4R3AQ6IN85 833 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 NSMFQ6X4W1 530 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 KRI1Q8N9T8 703 aaKnown RBP11.15□□□□□ -0.62
SF3B3-207ENST00000566095 DNERQ8NFT8 737 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
SF3B3-207ENST00000566095 TBCKQ8TEA7 893 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 USP28Q96RU2 1077 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 MORF4L1Q9UBU8 362 aa11.15□□□□□ -0.62
SF3B3-207ENST00000566095 A0A0G2JMZ2 1700 aa11.15□□□□□ -0.63
SF3B3-207ENST00000566095 RBBP6Q7Z6E9 1792 aaKnown RBP11.14□□□□□ -0.63
SF3B3-207ENST00000566095 TBX3O15119 743 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CCNT1O60563 726 aaKnown RBP11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CUTAO60888 179 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CYP3A4P08684 503 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 FCER1AP12319 257 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 ATP2B1P20020 1258 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 TM4SF4P48230 202 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
SF3B3-207ENST00000566095 FAM160A1Q05DH4 1040 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 PTPAQ15257 358 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 UBE2SQ16763 222 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 ZSCAN23Q3MJ62 389 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 USP17L6PQ6QN14 398 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CCDC73Q6ZRK6 1079 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 SLFN12Q8IYM2 578 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 RASGRP4Q8TDF6 673 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
SF3B3-207ENST00000566095 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 OR52Z1P0C646 297 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 MCM7P33993 719 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 MAP2K2P36507 400 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
SF3B3-207ENST00000566095 ATP2C1P98194 919 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-207ENST00000566095 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 CALCRLQ16602 461 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 RMDN3Q96TC7 470 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 MMP19Q99542 508 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
SF3B3-207ENST00000566095 TFIP11Q9UBB9 837 aaKnown RBP11.13□□□□□ -0.63
SF3B3-207ENST00000566095 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
SF3B3-207ENST00000566095 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
SF3B3-207ENST00000566095 RLFQ13129 1914 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 FAM155AB1AL88 458 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 NFIBO00712 420 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 MAFGO15525 162 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 SLC26A4O43511 780 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CA12O43570 354 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CYP2C8P10632 490 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 ERCC3P19447 782 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 PTPREP23469 700 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CCND2P30279 289 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CIITAP33076 1130 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 BAATQ14032 418 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 KIF22Q14807 665 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 ZNF174Q15697 407 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 SYTL5Q8TDW5 730 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 SHISA4Q96DD7 197 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 PGBD1Q96JS3 809 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 AK8Q96MA6 479 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 FAM20AQ96MK3 541 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 BTBD7Q9P203 1132 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 HOOK1Q9UJC3 728 aaKnown RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 PCDHB6Q9Y5E3 794 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 SRPRBQ9Y5M8 271 aaKnown RBP11.12□□□□□ -0.63
SF3B3-207ENST00000566095 CLIC4Q9Y696 253 aa11.12□□□□□ -0.63
SF3B3-207ENST00000566095 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 CYP3A7-CYP3A51PA0A087WV96 503 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 ASB14A6NK59 587 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 OPLAHO14841 1288 aa11.11□□□□□ -0.63
SF3B3-207ENST00000566095 TLR2O60603 784 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms