RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 GHRHRQ02643 423 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
KNOP1-203ENST00000565844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.47■□□□□ 0.39
KNOP1-203ENST00000565844 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 TEX2Q8IWB9 1127 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 MAF1Q9H063 256 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 UNC93B1Q9H1C4 597 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
KNOP1-203ENST00000565844 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
KNOP1-203ENST00000565844 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
KNOP1-203ENST00000565844 NR5A1Q13285 461 aa17.46■□□□□ 0.39
KNOP1-203ENST00000565844 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
KNOP1-203ENST00000565844 FCHSD1Q86WN1 690 aa17.46■□□□□ 0.39
KNOP1-203ENST00000565844 PCDHA6Q9UN73 950 aa17.46■□□□□ 0.39
KNOP1-203ENST00000565844 PCDHA8Q9Y5H6 950 aa17.46■□□□□ 0.39
KNOP1-203ENST00000565844 MYH7BA7E2Y1 1941 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 M0R2N6 131 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 STRNO43815 780 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 INHAP05111 366 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 UBXN2AP68543 259 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
KNOP1-203ENST00000565844 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 ABRAQ8N0Z2 381 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 SLAIN1Q8ND83 568 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 SYTL5Q8TDW5 730 aaPredicted RBP17.45■□□□□ 0.38
KNOP1-203ENST00000565844 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
KNOP1-203ENST00000565844 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
KNOP1-203ENST00000565844 COL20A1Q9P218 1284 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 CEP290O15078 2479 aa17.45■□□□□ 0.38
KNOP1-203ENST00000565844 CCDC194A0A1B0GVG4 234 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 PGK2P07205 417 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 ZSCAN22P10073 491 aaPredicted RBP17.44■□□□□ 0.38
KNOP1-203ENST00000565844 PTPREP23469 700 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 ADORA2AP29274 412 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
KNOP1-203ENST00000565844 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
KNOP1-203ENST00000565844 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 FOSP01100 380 aaPredicted RBP17.43■□□□□ 0.38
KNOP1-203ENST00000565844 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
KNOP1-203ENST00000565844 NUCB2P80303 420 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 GRB14Q14449 540 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 PURBQ96QR8 312 aaKnown RBP17.43■□□□□ 0.38
KNOP1-203ENST00000565844 ANO3Q9BYT9 981 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 LRRC37A2A6NM11 1700 aa17.43■□□□□ 0.38
KNOP1-203ENST00000565844 ALPK3Q96L96 1907 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 SLC34A2O95436 690 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 BRD1O95696 1058 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 TRIM32Q13049 653 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 RESTQ13127 1097 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 NONOQ15233 471 aaKnown RBP eCLIP17.42■□□□□ 0.38
KNOP1-203ENST00000565844 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 ZDHHC9Q9Y397 364 aa17.42■□□□□ 0.38
KNOP1-203ENST00000565844 F13A1P00488 732 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
KNOP1-203ENST00000565844 MORN1Q5T089 497 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 ARHGEF16Q5VV41 709 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 BRAPQ7Z569 592 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 SOCS4Q8WXH5 440 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 ZSCAN16Q9H4T2 348 aaPredicted RBP17.41■□□□□ 0.38
KNOP1-203ENST00000565844 CHMP5Q9NZZ3 219 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 RPTORQ8N122 1335 aa17.41■□□□□ 0.38
KNOP1-203ENST00000565844 SOWAHBA6NEL2 793 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 COBLO75128 1261 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 GJB1P08034 283 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 EIF2AK2P19525 551 aaKnown RBP17.4■□□□□ 0.38
KNOP1-203ENST00000565844 CYP2B6P20813 491 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 GJA8P48165 433 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 IRF5Q13568 498 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 INF2Q27J81 1249 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 DNERQ8NFT8 737 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
KNOP1-203ENST00000565844 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
KNOP1-203ENST00000565844 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 NUDT12Q9BQG2 462 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
KNOP1-203ENST00000565844 ASTN1O14525 1302 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 MCM3APO60318 1980 aa17.4■□□□□ 0.38
KNOP1-203ENST00000565844 SREBF1P36956 1147 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms