RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 TXNP10599 105 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 USH1GQ495M9 461 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 TMEM67Q5HYA8 995 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 UHRF1Q96T88 793 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 TANC1Q9C0D5 1861 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 NEDD4P46934 1319 aa13.6□□□□□ -0.23
NSMCE1-209ENST00000565384 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 TRIM6-TRIM34B2RNG4 842 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 B4DLN1 442 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 PITPNM1O00562 1244 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 BFSP2Q13515 415 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 GPATCH4Q5T3I0 446 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 NOD1Q9Y239 953 aa13.59□□□□□ -0.23
NSMCE1-209ENST00000565384 RFXAPO00287 272 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 COL9A1P20849 921 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 HDAC1Q13547 482 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 ESR2Q92731 530 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 UBA5Q9GZZ9 404 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 CERS4Q9HA82 394 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 TTC28Q96AY4 2481 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 MYO9BQ13459 2157 aa13.58□□□□□ -0.24
NSMCE1-209ENST00000565384 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 MMP3P08254 477 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 SKIV2LQ15477 1246 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 HERC6Q8IVU3 1022 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 AFG1LQ8WV93 481 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 MTCH2Q9Y6C9 303 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 ABCB11O95342 1321 aa13.57□□□□□ -0.24
NSMCE1-209ENST00000565384 EPOPA6NHQ4 379 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 ZNF213O14771 459 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 ARHGEF15O94989 841 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 TFF2Q03403 129 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 TAP1Q03518 808 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 PTGISQ16647 500 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 LY6KQ17RY6 165 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 CCDC62Q6P9F0 684 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 CCDC155Q8N6L0 562 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 PNMA1Q8ND90 353 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 SYTL5Q8TDW5 730 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 TBC1D5Q92609 795 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 MAF1Q9H063 256 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 COL20A1Q9P218 1284 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
NSMCE1-209ENST00000565384 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 KIF28PB7ZC32 967 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 KDM4AO75164 1064 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 GH1P01241 217 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 BMP1P13497 986 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 SDSP20132 328 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 NT5C2P49902 561 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 ARHGAP1Q07960 439 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 CCDC178Q5BJE1 867 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 GDF6Q6KF10 455 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 ADGRF4Q8IZF3 695 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 AFAP1L1Q8TED9 768 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 KAT2BQ92831 832 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 CTAGE1Q96RT6 745 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
NSMCE1-209ENST00000565384 CASTP20810 708 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 KCNJ6P48051 423 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 KCNQ1P51787 676 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 STXBP2Q15833 593 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 KRT40Q6A162 431 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
NSMCE1-209ENST00000565384 MCF2L2Q86YR7 1114 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms