RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 DEFB128Q7Z7B8 93 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
CDR2-204ENST00000564542 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 BDP1A6H8Y1 2624 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 B4DLN1 442 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 MRPL12P52815 198 aaKnown RBP16.55■□□□□ 0.24
CDR2-204ENST00000564542 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
CDR2-204ENST00000564542 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 GPATCH4Q5T3I0 446 aaKnown RBP16.55■□□□□ 0.24
CDR2-204ENST00000564542 MFSD6Q6ZSS7 791 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 SLC9A7Q96T83 725 aa16.55■□□□□ 0.24
CDR2-204ENST00000564542 CA3P07451 260 aa16.54■□□□□ 0.24
CDR2-204ENST00000564542 TXNP10599 105 aaKnown RBP16.54■□□□□ 0.24
CDR2-204ENST00000564542 RRP1P56182 461 aaKnown RBP16.54■□□□□ 0.24
CDR2-204ENST00000564542 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
CDR2-204ENST00000564542 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
CDR2-204ENST00000564542 COPS5Q92905 334 aa16.54■□□□□ 0.24
CDR2-204ENST00000564542 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
CDR2-204ENST00000564542 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
CDR2-204ENST00000564542 NEDD4P46934 1319 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 IQCF3P0C7M6 154 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 BFSP2Q13515 415 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 USH1GQ495M9 461 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 MICALL1Q8N3F8 863 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 PHOSPHO2Q8TCD6 241 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 ESR2Q92731 530 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 MAF1Q9H063 256 aa16.53■□□□□ 0.24
CDR2-204ENST00000564542 ARIH2O95376 493 aa16.52■□□□□ 0.24
CDR2-204ENST00000564542 POU3F3P20264 500 aaPredicted RBP16.52■□□□□ 0.24
CDR2-204ENST00000564542 NT5C2P49902 561 aa16.52■□□□□ 0.24
CDR2-204ENST00000564542 MFAP1P55081 439 aaKnown RBP16.52■□□□□ 0.24
CDR2-204ENST00000564542 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
CDR2-204ENST00000564542 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.24
CDR2-204ENST00000564542 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
CDR2-204ENST00000564542 ABCB11O95342 1321 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 BAIAP3O94812 1187 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 GOLGA8HP0CJ92 632 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 COL9A1P20849 921 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
CDR2-204ENST00000564542 AAK1Q2M2I8 961 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 CCDC62Q6P9F0 684 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 ZKSCAN3Q9BRR0 538 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.236e-7■■■□□ 15
CDR2-204ENST00000564542 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
CDR2-204ENST00000564542 NCOR1O75376 2440 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
CDR2-204ENST00000564542 MMP3P08254 477 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 PTGISQ16647 500 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 CAGE1Q8TC20 777 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 MTCH2Q9Y6C9 303 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 PTPRSQ13332 1948 aa16.5■□□□□ 0.23
CDR2-204ENST00000564542 COL4A4P53420 1690 aaPredicted RBP16.5■□□□□ 0.23
CDR2-204ENST00000564542 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 ZNF213O14771 459 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 GH1P01241 217 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 TFF2Q03403 129 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 TAP1Q03518 808 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 ARHGAP1Q07960 439 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 IQCA1Q86XH1 822 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 MCF2L2Q86YR7 1114 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 SYTL5Q8TDW5 730 aaPredicted RBP16.49■□□□□ 0.23
CDR2-204ENST00000564542 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
CDR2-204ENST00000564542 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 CERS4Q9HA82 394 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 COL20A1Q9P218 1284 aa16.49■□□□□ 0.23
CDR2-204ENST00000564542 TET1Q8NFU7 2136 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 RFXAPO00287 272 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 BMP1P13497 986 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 SDSP20132 328 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
CDR2-204ENST00000564542 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 SEPT14Q6ZU15 432 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 CTAGE1Q96RT6 745 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 IWS1Q96ST2 819 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 KAT14Q9H8E8 782 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 MYH6P13533 1939 aa16.48■□□□□ 0.23
CDR2-204ENST00000564542 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
CDR2-204ENST00000564542 KDM4AO75164 1064 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms