RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 UHRF1Q96T88 793 aaPredicted RBP21.95■■□□□ 1.1
NME3-204ENST00000563498 MAF1Q9H063 256 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 A0A0D9SFI3 127 aa21.94■■□□□ 1.1
NME3-204ENST00000563498 FAM47CQ5HY64 1035 aa21.94■■□□□ 1.1
NME3-204ENST00000563498 IQCF3P0C7M6 154 aa21.93■■□□□ 1.1
NME3-204ENST00000563498 TXNP10599 105 aaKnown RBP21.93■■□□□ 1.1
NME3-204ENST00000563498 COL9A1P20849 921 aa21.93■■□□□ 1.1
NME3-204ENST00000563498 GPATCH4Q5T3I0 446 aaKnown RBP21.93■■□□□ 1.1
NME3-204ENST00000563498 MFSD6Q6ZSS7 791 aa21.93■■□□□ 1.1
NME3-204ENST00000563498 RETREG2Q8NC44 543 aa21.93■■□□□ 1.1
NME3-204ENST00000563498 TANC1Q9C0D5 1861 aa21.93■■□□□ 1.1
NME3-204ENST00000563498 CA3P07451 260 aa21.92■■□□□ 1.1
NME3-204ENST00000563498 NT5C2P49902 561 aa21.92■■□□□ 1.1
NME3-204ENST00000563498 BFSP2Q13515 415 aa21.92■■□□□ 1.1
NME3-204ENST00000563498 AAK1Q2M2I8 961 aa21.92■■□□□ 1.1
NME3-204ENST00000563498 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
NME3-204ENST00000563498 TRANK1O15050 2925 aa21.91■■□□□ 1.1
NME3-204ENST00000563498 CCDC171Q6TFL3 1326 aa21.91■■□□□ 1.1
NME3-204ENST00000563498 ZNF589Q86UQ0 364 aaPredicted RBP21.91■■□□□ 1.1
NME3-204ENST00000563498 COPS5Q92905 334 aa21.91■■□□□ 1.1
NME3-204ENST00000563498 RNF41Q9H4P4 317 aaPredicted RBP21.91■■□□□ 1.1
NME3-204ENST00000563498 BDP1A6H8Y1 2624 aa21.91■■□□□ 1.1
NME3-204ENST00000563498 NCOR1O75376 2440 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 GTPBP6O43824 516 aaPredicted RBP21.9■■□□□ 1.1
NME3-204ENST00000563498 BAIAP3O94812 1187 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 BMP1P13497 986 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 HAND2P61296 217 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 DGKHQ86XP1 1220 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 MICALL1Q8N3F8 863 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 NOD1Q9Y239 953 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 MTCH2Q9Y6C9 303 aa21.9■■□□□ 1.1
NME3-204ENST00000563498 ARIH2O95376 493 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 NMIQ13287 307 aaPredicted RBP21.89■■□□□ 1.09
NME3-204ENST00000563498 HDAC1Q13547 482 aaPredicted RBP21.89■■□□□ 1.09
NME3-204ENST00000563498 CCDC62Q6P9F0 684 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 SESTD1Q86VW0 696 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 TBC1D10CQ8IV04 446 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 HERC6Q8IVU3 1022 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 CCDC155Q8N6L0 562 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 CAGE1Q8TC20 777 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 ESR2Q92731 530 aa21.89■■□□□ 1.09
NME3-204ENST00000563498 FTOQ9C0B1 505 aaKnown RBP eCLIP21.89■■□□□ 1.09
NME3-204ENST00000563498 KIF28PB7ZC32 967 aa21.88■■□□□ 1.09
NME3-204ENST00000563498 MFAP1P55081 439 aaKnown RBP21.88■■□□□ 1.09
NME3-204ENST00000563498 TAP1Q03518 808 aa21.88■■□□□ 1.09
NME3-204ENST00000563498 USH1GQ495M9 461 aa21.88■■□□□ 1.09
NME3-204ENST00000563498 AFAP1L1Q8TED9 768 aa21.88■■□□□ 1.09
NME3-204ENST00000563498 REV3LO60673 3130 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 ABCB11O95342 1321 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 GOLGA8HP0CJ92 632 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 TFF2Q03403 129 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 PTGISQ16647 500 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 CCDC178Q5BJE1 867 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 NSUN6Q8TEA1 469 aaKnown RBP21.87■■□□□ 1.09
NME3-204ENST00000563498 PPP1R13LQ8WUF5 828 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 XIRP2A4UGR9 3374 aa21.87■■□□□ 1.09
NME3-204ENST00000563498 RFXAPO00287 272 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 GH1P01241 217 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 MMP3P08254 477 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
NME3-204ENST00000563498 SKIV2LQ15477 1246 aaKnown RBP21.86■■□□□ 1.09
NME3-204ENST00000563498 CDC37Q16543 378 aaPredicted RBP21.86■■□□□ 1.09
NME3-204ENST00000563498 AFG1LQ8WV93 481 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 IWS1Q96ST2 819 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 CERS4Q9HA82 394 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 COG5Q9UP83 839 aa21.86■■□□□ 1.09
NME3-204ENST00000563498 NEDD4P46934 1319 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 EPOPA6NHQ4 379 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 PARNO95453 639 aaKnown RBP21.85■■□□□ 1.09
NME3-204ENST00000563498 ARHGAP1Q07960 439 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 RBL2Q08999 1139 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 IQCA1Q86XH1 822 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 MCF2L2Q86YR7 1114 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 PNMA1Q8ND90 353 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 SYTL5Q8TDW5 730 aaPredicted RBP21.85■■□□□ 1.09
NME3-204ENST00000563498 ANKS1AQ92625 1134 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 CTAGE1Q96RT6 745 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 UBA5Q9GZZ9 404 aa21.85■■□□□ 1.09
NME3-204ENST00000563498 PRRC2BQ5JSZ5 2229 aaKnown RBP21.84■■□□□ 1.09
NME3-204ENST00000563498 TRIM6-TRIM34B2RNG4 842 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 ZNF213O14771 459 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 CASTP20810 708 aaKnown RBP21.84■■□□□ 1.09
NME3-204ENST00000563498 KCNJ6P48051 423 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 STXBP2Q15833 593 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 SEPT14Q6ZU15 432 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 ARNTL2Q8WYA1 636 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 KAT2BQ92831 832 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 NECAB3Q96P71 396 aaPredicted RBP21.84■■□□□ 1.09
NME3-204ENST00000563498 TAAR1Q96RJ0 339 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 ZKSCAN3Q9BRR0 538 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 CPVLQ9H3G5 476 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 COL20A1Q9P218 1284 aa21.84■■□□□ 1.09
NME3-204ENST00000563498 TLL1O43897 1013 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 ARHGEF15O94989 841 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 SELPP16109 830 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 KCNQ1P51787 676 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 LY6KQ17RY6 165 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 GDF6Q6KF10 455 aaPredicted RBP21.83■■□□□ 1.09
NME3-204ENST00000563498 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms