RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 GAKO14976 1311 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 hCG_1642624A0A1W2PR95 340 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 BECN2A8MW95 431 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 PLSCR1O15162 318 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 RNGTTO60942 597 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 PPP1R37O75864 691 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 ACADSBP45954 432 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 SCNN1DP51172 638 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 PSMD6Q15008 389 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 ZNF365Q70YC5 407 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 RTL10Q7L3V2 364 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 LUZP1Q86V48 1076 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 DQX1Q8TE96 717 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 FAM129AQ9BZQ8 928 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 DNAJC18Q9H819 358 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 PLEKHA5Q9HAU0 1116 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 WDR62O43379 1518 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 PZPP20742 1482 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 GOLGA8MH3BSY2 632 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 USO1O60763 962 aaKnown RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 SHOX2O60902 331 aaPredicted RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 FOSP01100 380 aaPredicted RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 HSPA1LP34931 641 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 HNF1BP35680 557 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 HSD17B2P37059 387 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 KRT83P78385 493 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 ARID5BQ14865 1188 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 Q3C1V9 767 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 RNF220Q5VTB9 566 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 CCDC81Q6ZN84 652 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 FOXP3Q9BZS1 431 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 SUGCTQ9HAC7 445 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 CCDC177Q9NQR7 707 aaPredicted RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 CCDC151A5D8V7 595 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 HDAC3O15379 428 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 ATG7O95352 703 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 AARSP49588 968 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDH1-205ENST00000562836 COPAP53621 1224 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 GJA9P57773 515 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 IFFO1Q0D2I5 559 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 PPP4R4Q6NUP7 873 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 CORO6Q6QEF8 472 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 BCL7CQ8WUZ0 217 aaPredicted RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 NAT10Q9H0A0 1025 aaKnown RBP10.29□□□□□ -0.76
CDH1-205ENST00000562836 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 HACD3Q9P035 362 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 SATB2Q9UPW6 733 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 PCDHB2Q9Y5E7 798 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
CDH1-205ENST00000562836 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 GTPBP6O43824 516 aaPredicted RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 PDE1BQ01064 536 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 IKQ13123 557 aaPredicted RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 MAPRE1Q15691 268 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 LRRC8AQ8IWT6 810 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 TRPC4APQ8TEL6 797 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 IRGQQ8WZA9 623 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 COG3Q96JB2 828 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 DDX56Q9NY93 547 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 TRAV6A0A075B6T7 132 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 NOTOA8MTQ0 251 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 TSPAN9O75954 239 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 URI1O94763 535 aaPredicted RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 ATP6V1G2O95670 118 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 FLIIQ13045 1269 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 WDR44Q5JSH3 913 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 ARMC4Q5T2S8 1044 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 LVRNQ6Q4G3 990 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.768e-7■■■■□ 21
CDH1-205ENST00000562836 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 MGARPQ8TDB4 240 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 POM121Q96HA1 1249 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 TTPALQ9BTX7 342 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 SIRT5Q9NXA8 310 aa10.28□□□□□ -0.76
CDH1-205ENST00000562836 FAM32AQ9Y421 112 aaKnown RBP10.28□□□□□ -0.76
CDH1-205ENST00000562836 UHRF1BP1LA0JNW5 1464 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 RALGAPBQ86X10 1494 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 A6NCN8 305 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 PSMD14O00487 310 aa10.27□□□□□ -0.76
CDH1-205ENST00000562836 PRKACAP17612 351 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms