RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ERC2O15083 957 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 NMT2O60551 498 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 SLC16A2P36021 539 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 PDE4DQ08499 809 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 BAATQ14032 418 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 MPHOSPH6Q99547 160 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 MTG1Q9BT17 334 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 ICAM1P05362 532 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 KCNJ6P48051 423 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 RCAN3Q9UKA8 241 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 HCN4Q9Y3Q4 1203 aa12.38□□□□□ -0.43
CDC42BPB-207ENST00000560492 MYH6P13533 1939 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 NFIBO00712 420 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 PLA2G6O60733 806 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 BMP1P13497 986 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 RFC2P35250 354 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 BFSP2Q13515 415 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 IER5LQ5T953 404 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 SYDE2Q5VT97 1194 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 MTCH2Q9Y6C9 303 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 SCN10AQ9Y5Y9 1956 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
CDC42BPB-207ENST00000560492 TRANK1O15050 2925 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 TLL1O43897 1013 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 RNF207Q6ZRF8 634 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 COG5Q9UP83 839 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
CDC42BPB-207ENST00000560492 TET1Q8NFU7 2136 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 XIRP2A4UGR9 3374 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 B4DLN1 442 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 SEC24BO95487 1268 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 TAP1Q03518 808 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 HERC6Q8IVU3 1022 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 SCFD2Q8WU76 684 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 COPS5Q92905 334 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 HLA-CQ95604 372 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
CDC42BPB-207ENST00000560492 KPNA6O60684 536 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 PTGISQ16647 500 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 USH1GQ495M9 461 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 NFRKBQ6P4R8 1299 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 MORC4Q8TE76 937 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 DCTPP1Q9H773 170 aa12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42BPB-207ENST00000560492 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 GRB10Q13322 594 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 VWCEQ96DN2 955 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
CDC42BPB-207ENST00000560492 SIP14410 1827 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 ARHGEF15O94989 841 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 MX1P20591 662 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 PTPN11Q06124 597 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 SEPT14Q6ZU15 432 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 TMCO2Q7Z6W1 182 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-207ENST00000560492 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms