RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 MLLT1Q03111 559 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 TRIM32Q13049 653 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 NECTIN1Q15223 517 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 CDC37Q16543 378 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 BLOC1S2Q6QNY1 142 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 MB21D2Q8IYB1 491 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-219ENST00000560483 CRIPAKQ8N1N5 446 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 CHST13Q8NET6 341 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 TMEM87BQ96K49 555 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 MYL10Q9BUA6 226 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 ADAMTS5Q9UNA0 930 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 RIPK3Q9Y572 518 aa9.3□□□□□ -0.92
LRRC28-219ENST00000560483 BAZ2BQ9UIF8 2168 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 PLA2G6O60733 806 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 ICAM1P05362 532 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 RXRAP19793 462 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 CALML3P27482 149 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 PSMA5P28066 241 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 SEC23AQ15436 765 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 TKFCQ3LXA3 575 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 NOL8Q76FK4 1167 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 MICU3Q86XE3 530 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 ADGRF4Q8IZF3 695 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 ZNF654Q8IZM8 581 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 ABRAQ8N0Z2 381 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 TMTC2Q8N394 836 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 REPS2Q8NFH8 660 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 NPLOC4Q8TAT6 608 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 RANBP17Q9H2T7 1088 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 ZHX1Q9UKY1 873 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-219ENST00000560483 PNMA2Q9UL42 364 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 PLXNA1Q9UIW2 1896 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 RPTORQ8N122 1335 aa9.29□□□□□ -0.92
LRRC28-219ENST00000560483 SH2B2O14492 632 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 ATP2A1O14983 1001 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 COBLO75128 1261 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 AVPP01185 164 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CALM1P0DP23 149 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CALM2P0DP24 149 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CALM3P0DP25 149 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CPA1P15085 419 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 NOVP48745 357 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 ANTXR2P58335 489 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CACNB2Q08289 660 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 GRM4Q14833 912 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 ADCK5Q3MIX3 580 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 PRAMEF19Q5SWL8 479 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 ANO1Q5XXA6 986 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 RNF207Q6ZRF8 634 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 DHX32Q7L7V1 743 aaKnown RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 CCDC82Q8N4S0 544 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 FAM160A2Q8N612 972 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 U2AF1L4Q8WU68 220 aaKnown RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 ANKS1AQ92625 1134 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 THAP11Q96EK4 314 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 MAML3Q96JK9 1138 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 MPHOSPH6Q99547 160 aaKnown RBP9.28□□□□□ -0.92
LRRC28-219ENST00000560483 LY9Q9HBG7 655 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 FLRT1Q9NZU1 646 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 PFASO15067 1338 aa9.28□□□□□ -0.92
LRRC28-219ENST00000560483 DDAH1O94760 285 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 GJB1P08034 283 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 SNHG28P0DPA3 235 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 FECHP22830 423 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 CCND3P30281 292 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-219ENST00000560483 HSPA4P34932 840 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 GNAQP50148 359 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 QRICH1Q2TAL8 776 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 MUM1L1Q5H9M0 696 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 Q6ZUG5 572 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 IGDCC4Q8TDY8 1250 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 USP6NLQ92738 828 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 RRP36Q96EU6 259 aaKnown RBP9.27□□□□□ -0.93
LRRC28-219ENST00000560483 TINF2Q9BSI4 451 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 AMNQ9BXJ7 453 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
LRRC28-219ENST00000560483 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 MAD2L2Q9UI95 211 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 SNX14Q9Y5W7 946 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 SMCHD1A6NHR9 2005 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 ZNF536O15090 1300 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 ABCB11O95342 1321 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 BRCA2P51587 3418 aa9.27□□□□□ -0.93
LRRC28-219ENST00000560483 KLF18A0A0U1RQI7 1052 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 GOLGA8AA7E2F4 631 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 GOLGA8BA8MQT2 603 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 NFIBO00712 420 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 ZBTB43O43298 467 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 WFS1O76024 890 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms