RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
LRRC28-213ENST00000559399 HERVK_113Q902F9 699 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 PBX4Q9BYU1 374 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 JMJD4Q9H9V9 463 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 TRMT13Q9NUP7 481 aaKnown RBP17.43■□□□□ 0.38
LRRC28-213ENST00000559399 MRPL11Q9Y3B7 192 aaKnown RBP17.43■□□□□ 0.38
LRRC28-213ENST00000559399 A6NJR5 290 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 FGBP02675 491 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 COPS5Q92905 334 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 ZNF576Q9H609 170 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
LRRC28-213ENST00000559399 MCM3APO60318 1980 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 GRXCR1A8MXD5 290 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 ARIH2O95376 493 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 PBX2P40425 430 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 TRDNQ13061 729 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 SEC23AQ15436 765 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 TBC1D5Q92609 795 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 TAAR1Q96RJ0 339 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 RMDN3Q96TC7 470 aa17.41■□□□□ 0.38
LRRC28-213ENST00000559399 CXXC1Q9P0U4 656 aaPredicted RBP17.41■□□□□ 0.38
LRRC28-213ENST00000559399 CDH23Q9H251 3354 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 CYP2C9P11712 490 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 RAB30Q15771 203 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 NBPF20Q3BBV1 942 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 NFRKBQ6P4R8 1299 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 CCDC62Q6P9F0 684 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 OTOP2Q7RTS6 562 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 RPUSD2Q8IZ73 545 aaKnown RBP17.4■□□□□ 0.38
LRRC28-213ENST00000559399 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
LRRC28-213ENST00000559399 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
LRRC28-213ENST00000559399 LCTP09848 1927 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 PFKMP08237 780 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 STXBP2Q15833 593 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 ARHGEF16Q5VV41 709 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 SCLYQ96I15 445 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 MSRAQ9UJ68 235 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 LAMA4Q16363 1823 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 UNC80Q8N2C7 3258 aa17.39■□□□□ 0.37
LRRC28-213ENST00000559399 ZBTB5O15062 677 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 CFBP00751 764 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 GH1P01241 217 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 CYP21A2P08686 494 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 EIF2AK2P19525 551 aaKnown RBP17.38■□□□□ 0.37
LRRC28-213ENST00000559399 CHMLP26374 656 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 PTPN11Q06124 597 aaPredicted RBP17.38■□□□□ 0.37
LRRC28-213ENST00000559399 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
LRRC28-213ENST00000559399 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 COL25A1Q9BXS0 654 aaPredicted RBP17.38■□□□□ 0.37
LRRC28-213ENST00000559399 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
LRRC28-213ENST00000559399 ERICH2A1L162 156 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 PALM3A6NDB9 673 aaPredicted RBP17.37■□□□□ 0.37
LRRC28-213ENST00000559399 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
LRRC28-213ENST00000559399 MMP3P08254 477 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 HSD17B4P51659 736 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 GHRHRQ02643 423 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 PTH1RQ03431 593 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 NOD1Q9Y239 953 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 EYSQ5T1H1 3165 aa17.37■□□□□ 0.37
LRRC28-213ENST00000559399 ZBBXA8MT70 800 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 PITPNM1O00562 1244 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 OPLAHO14841 1288 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 RFC2P35250 354 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 GRM4Q14833 912 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 GAS2L1Q99501 681 aaPredicted RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
LRRC28-213ENST00000559399 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
LRRC28-213ENST00000559399 SGSM2O43147 1006 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 NR3C2P08235 984 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 TRAF1Q13077 416 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 BFSP2Q13515 415 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 RETREG2Q8NC44 543 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 NCOA7Q8NI08 942 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 NKX2-4Q9H2Z4 354 aa17.35■□□□□ 0.37
LRRC28-213ENST00000559399 PRDM12Q9H4Q4 367 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms