RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 NPY5RQ15761 445 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 PIK3AP1Q6ZUJ8 805 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 FERMT3Q86UX7 667 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 FAM133AQ8N9E0 248 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 TAAR1Q96RJ0 339 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 APBA2Q99767 749 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 PXMP2Q9NR77 195 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 COL20A1Q9P218 1284 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 SRRDQ9UH36 339 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 NOL7Q9UMY1 257 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 MTMR6Q9Y217 621 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 TRIM17Q9Y577 477 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 RBBP6Q7Z6E9 1792 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 DNAJC25-GNG10A0A024R161 153 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 LOC102724159A0A0B4J2E5 919 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 KIF28PB7ZC32 967 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 M0R2N6 131 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 HOXC6P09630 235 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 MYCLP12524 364 aaPredicted RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 U2AF2P26368 475 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ZNF76P36508 570 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 SREBF1P36956 1147 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 FLT3LGP49771 235 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ALDH5A1P51649 535 aaPredicted RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 LBX1P52954 281 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ARHGAP4P98171 946 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 PDE4DQ08499 809 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 PWP2Q15269 919 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 INF2Q27J81 1249 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 BRAPQ7Z569 592 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ZNF467Q7Z7K2 595 aaPredicted RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 TRMT44Q8IYL2 757 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 RAET1EQ8TD07 263 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 TBCKQ8TEA7 893 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 USP6NLQ92738 828 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 TNFRSF25Q93038 417 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 MAML3Q96JK9 1138 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 IWS1Q96ST2 819 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 NAP1L4Q99733 375 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 PDCD2LQ9BRP1 358 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ZSCAN16Q9H4T2 348 aaPredicted RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 GJD2Q9UKL4 321 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 CIZ1Q9ULV3 898 aaPredicted RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 DIS3Q9Y2L1 958 aaKnown RBP7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 ZNF236Q9UL36 1845 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 FRMPD4Q14CM0 1322 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 RPTORQ8N122 1335 aa7.52□□□□□ -1.21
CHRNA3-204ENST00000559002 PLXNB2O15031 1838 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 FAM205CA6NFA0 338 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 BRD1O95696 1058 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 F13A1P00488 732 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 NR3C2P08235 984 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 ATP2B1P20020 1258 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 DDIT3P35638 169 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 RESTQ13127 1097 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 IRF5Q13568 498 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 PKP1Q13835 747 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 PGM5Q15124 567 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 STXBP2Q15833 593 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 LETM2Q2VYF4 491 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 RILPL1Q5EBL4 403 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 MFSD14CQ5VZR4 134 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 OLFML2BQ68BL8 750 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 ARMCX2Q7L311 632 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 OTOP1Q7RTM1 612 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 CTU1Q7Z7A3 348 aaKnown RBP7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 NEK8Q86SG6 692 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 MSL3Q8N5Y2 521 aaKnown RBP7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 NPLOC4Q8TAT6 608 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 TINF2Q9BSI4 451 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 CHMP5Q9NZZ3 219 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 CNPY2Q9Y2B0 182 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 ATP6V1DQ9Y5K8 247 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 ASTN1O14525 1302 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 SYNGAP1Q96PV0 1343 aa7.51□□□□□ -1.21
CHRNA3-204ENST00000559002 ADCY3O60266 1144 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 CCNT1O60563 726 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 STAM2O75886 525 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 CYP3A4P08684 503 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 XRCC5P13010 732 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 GCFC2P16383 781 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 EDNRBP24530 442 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 TRAPPC10P48553 1259 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 USP11P51784 963 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 CAP1Q01518 475 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 CCL14Q16627 93 aa7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 EARS2Q5JPH6 523 aaKnown RBP7.5□□□□□ -1.21
CHRNA3-204ENST00000559002 TTC38Q5R3I4 469 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms