RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 PPP1R11O60927 126 aaPredicted RBP24.91■■□□□ 1.58
CRNDE-205ENST00000558952 CPT1AP50416 773 aa24.91■■□□□ 1.58
CRNDE-205ENST00000558952 FAAP100Q0VG06 881 aa24.91■■□□□ 1.58
CRNDE-205ENST00000558952 LRIT3Q3SXY7 679 aa24.91■■□□□ 1.58
CRNDE-205ENST00000558952 BRDTQ58F21 947 aaPredicted RBP24.91■■□□□ 1.58
CRNDE-205ENST00000558952 MAP3K20Q9NYL2 800 aaKnown RBP24.91■■□□□ 1.58
CRNDE-205ENST00000558952 COL20A1Q9P218 1284 aa24.91■■□□□ 1.58
CRNDE-205ENST00000558952 PNMA6FA0A0J9YX94 578 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 SOX1O00570 391 aaPredicted RBP24.9■■□□□ 1.58
CRNDE-205ENST00000558952 CDK7P50613 346 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 TTLL4Q14679 1199 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 STXBP2Q15833 593 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 SAMD3Q8N6K7 520 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 MYL10Q9BUA6 226 aa24.9■■□□□ 1.58
CRNDE-205ENST00000558952 GPHNQ9NQX3 736 aaPredicted RBP24.9■■□□□ 1.58
CRNDE-205ENST00000558952 CYTH3O43739 400 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 CALM1P0DP23 149 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 CALM2P0DP24 149 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 CALM3P0DP25 149 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 TXNP10599 105 aaKnown RBP24.89■■□□□ 1.58
CRNDE-205ENST00000558952 EIF2AK2P19525 551 aaKnown RBP24.89■■□□□ 1.58
CRNDE-205ENST00000558952 LIFRP42702 1097 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 GNAQP50148 359 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 HSD17B4P51659 736 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 SLC35G1Q2M3R5 365 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 LRCH3Q96II8 777 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 LZTS2Q9BRK4 669 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 SEZ6LQ9BYH1 1024 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 POLR3EQ9NVU0 708 aa24.89■■□□□ 1.58
CRNDE-205ENST00000558952 GHRHRQ02643 423 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 ITGA7Q13683 1181 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 PIBF1Q8WXW3 757 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 RRP36Q96EU6 259 aaKnown RBP24.88■■□□□ 1.57
CRNDE-205ENST00000558952 NEK1Q96PY6 1258 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 PXMP2Q9NR77 195 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 SLC12A7Q9Y666 1083 aa24.88■■□□□ 1.57
CRNDE-205ENST00000558952 RANBP2P49792 3224 aaKnown RBP24.88■■□□□ 1.57
CRNDE-205ENST00000558952 DNAH12Q6ZR08 3092 aa24.87■■□□□ 1.57
CRNDE-205ENST00000558952 GCOM1H8Y6P7 765 aaPredicted RBP24.87■■□□□ 1.57
CRNDE-205ENST00000558952 OPLAHO14841 1288 aa24.87■■□□□ 1.57
CRNDE-205ENST00000558952 POLR2MP0CAP2 368 aa24.87■■□□□ 1.57
CRNDE-205ENST00000558952 SEPT14Q6ZU15 432 aa24.87■■□□□ 1.57
CRNDE-205ENST00000558952 SPZ1Q9BXG8 430 aa24.87■■□□□ 1.57
CRNDE-205ENST00000558952 SEC63Q9UGP8 760 aaKnown RBP24.87■■□□□ 1.57
CRNDE-205ENST00000558952 NR3C2P08235 984 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 MYL3P08590 195 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 SMARCA1P28370 1054 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 KRT32Q14532 448 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 SYNE3Q6ZMZ3 975 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 FAM126BQ8IXS8 530 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 LRRC2Q9BYS8 371 aa24.86■■□□□ 1.57
CRNDE-205ENST00000558952 EIF3JO75822 258 aaKnown RBP24.85■■□□□ 1.57
CRNDE-205ENST00000558952 ITGB8P26012 769 aa24.85■■□□□ 1.57
CRNDE-205ENST00000558952 HOXA13P31271 388 aaPredicted RBP24.85■■□□□ 1.57
CRNDE-205ENST00000558952 FPGSQ05932 587 aa24.85■■□□□ 1.57
CRNDE-205ENST00000558952 SLC43A3Q8NBI5 491 aa24.85■■□□□ 1.57
CRNDE-205ENST00000558952 TBX21Q9UL17 535 aa24.85■■□□□ 1.57
CRNDE-205ENST00000558952 KPNA6O60684 536 aa24.84■■□□□ 1.57
CRNDE-205ENST00000558952 TIMP1P01033 207 aa24.84■■□□□ 1.57
CRNDE-205ENST00000558952 RXRAP19793 462 aa24.84■■□□□ 1.57
CRNDE-205ENST00000558952 PSMC6P62333 389 aa24.84■■□□□ 1.57
CRNDE-205ENST00000558952 COPS5Q92905 334 aa24.84■■□□□ 1.57
CRNDE-205ENST00000558952 MTG1Q9BT17 334 aaPredicted RBP24.84■■□□□ 1.57
CRNDE-205ENST00000558952 ARIH2O95376 493 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 GH1P01241 217 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 MYCLP12524 364 aaPredicted RBP24.83■■□□□ 1.57
CRNDE-205ENST00000558952 PURAQ00577 322 aaKnown RBP24.83■■□□□ 1.57
CRNDE-205ENST00000558952 COL9A3Q14050 684 aaPredicted RBP24.83■■□□□ 1.57
CRNDE-205ENST00000558952 SHHQ15465 462 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 GPR153Q6NV75 609 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 CCDC62Q6P9F0 684 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 SGMS1Q86VZ5 419 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 PDCD2LQ9BRP1 358 aa24.83■■□□□ 1.57
CRNDE-205ENST00000558952 A6NJR5 290 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 PLEKHA8P1O95397 391 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 LY6KQ17RY6 165 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 TSGA10IPQ3SY00 556 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 DHX32Q7L7V1 743 aaKnown RBP24.82■■□□□ 1.56
CRNDE-205ENST00000558952 FCHSD1Q86WN1 690 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 MICU3Q86XE3 530 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 MRVI1Q9Y6F6 885 aa24.82■■□□□ 1.56
CRNDE-205ENST00000558952 CD4P01730 458 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 HMGB1P09429 215 aaKnown RBP24.81■■□□□ 1.56
CRNDE-205ENST00000558952 CCND2P30279 289 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 PGM5Q15124 567 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 C9orf50Q5SZB4 431 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 MFSD5Q6N075 450 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 RAB11FIP4Q86YS3 637 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 RASEFQ8IZ41 740 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 SRBD1Q8N5C6 995 aaKnown RBP24.81■■□□□ 1.56
CRNDE-205ENST00000558952 FANCBQ8NB91 859 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 CUL5Q93034 780 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 PPP1R12CQ9BZL4 782 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 GRIN2DO15399 1336 aa24.81■■□□□ 1.56
CRNDE-205ENST00000558952 CMTR1Q8N1G2 835 aaKnown RBP24.8■■□□□ 1.56
CRNDE-205ENST00000558952 TMEM199Q8N511 208 aa24.8■■□□□ 1.56
CRNDE-205ENST00000558952 REC8O95072 547 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 FGD1P98174 961 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 ARHGAP1Q07960 439 aa24.79■■□□□ 1.56
CRNDE-205ENST00000558952 PPIGQ13427 754 aaKnown RBP eCLIP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms