RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TMEM63BQ5T3F8 832 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 CLEC4DQ8WXI8 215 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 VTI1AQ96AJ9 217 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 PRDM5Q9NQX1 630 aaPredicted RBP13.98□□□□□ -0.17
TPM1-216ENST00000558910 PDGFCQ9NRA1 345 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 MAD2L2Q9UI95 211 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 ASTN1O14525 1302 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 CCDC69A6NI79 296 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 DNM1LO00429 736 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
TPM1-216ENST00000558910 COL9A1P20849 921 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 RPS6P62753 249 aaKnown RBP13.97□□□□□ -0.17
TPM1-216ENST00000558910 BEX3Q00994 111 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 NBR1Q14596 966 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
TPM1-216ENST00000558910 CCDC82Q8N4S0 544 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 PIGSQ96S52 555 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 SLC4A5Q9BY07 1137 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
TPM1-216ENST00000558910 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 ASB14A6NK59 587 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 CFBP00751 764 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 COL6A1P12109 1028 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 CPA1P15085 419 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 MCM5P33992 734 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 ALDH5A1P51649 535 aaPredicted RBP13.96□□□□□ -0.17
TPM1-216ENST00000558910 RTP1P59025 263 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 TNFAIP2Q03169 654 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 GRM4Q14833 912 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 NECTIN1Q15223 517 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 MAMDC4Q6UXC1 1216 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 RNF180Q86T96 592 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 IGDCC4Q8TDY8 1250 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 LY9Q9HBG7 655 aa13.96□□□□□ -0.17
TPM1-216ENST00000558910 MCM3APO60318 1980 aa13.96□□□□□ -0.18
TPM1-216ENST00000558910 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
TPM1-216ENST00000558910 DYNC1LI2O43237 492 aaPredicted RBP13.95□□□□□ -0.18
TPM1-216ENST00000558910 MDM2Q00987 491 aaPredicted RBP13.95□□□□□ -0.18
TPM1-216ENST00000558910 PDE4DQ08499 809 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 KCNA10Q16322 511 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 SLC35G1Q2M3R5 365 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 ADCK5Q3MIX3 580 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
TPM1-216ENST00000558910 KCNV2Q8TDN2 545 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 TAAR1Q96RJ0 339 aa13.95□□□□□ -0.18
TPM1-216ENST00000558910 ABCB11O95342 1321 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 SORBS3O60504 671 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 PQBP1O60828 265 aaKnown RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 CAPN2P17655 700 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 NT5C2P49902 561 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 CHMP4BP1P59074 171 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 FGD1P98174 961 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 GNASQ5JWF2 1037 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 C6orf132Q5T0Z8 1188 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 SLC39A5Q6ZMH5 540 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
TPM1-216ENST00000558910 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 CTCFLQ8NI51 663 aaPredicted RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 SPC25Q9HBM1 224 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 RBM27Q9P2N5 1060 aaKnown RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 NRBP1Q9UHY1 535 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
TPM1-216ENST00000558910 PCDHA1Q9Y5I3 950 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 ALPK3Q96L96 1907 aa13.94□□□□□ -0.18
TPM1-216ENST00000558910 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
TPM1-216ENST00000558910 WDR19Q8NEZ3 1342 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 A0A1W2PQ45 241 aaPredicted RBP13.93□□□□□ -0.18
TPM1-216ENST00000558910 A0A1W2PQY0 241 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 ZBTB5O15062 677 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 SMPD1P17405 629 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 EIF2AK2P19525 551 aaKnown RBP13.93□□□□□ -0.18
TPM1-216ENST00000558910 TROAPQ12815 778 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 PPP1R13LQ8WUF5 828 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 AMNQ9BXJ7 453 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 KATNBL1Q9H079 304 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 AP5M1Q9H0R1 490 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
TPM1-216ENST00000558910 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 CYTH3O43739 400 aa13.92□□□□□ -0.18
TPM1-216ENST00000558910 ADAMTS4O75173 837 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms