RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PIGSQ96S52 555 aa14.36□□□□□ -0.11
CDC42BPB-202ENST00000558321 IWS1Q96ST2 819 aa14.36□□□□□ -0.11
CDC42BPB-202ENST00000558321 POLR3EQ9NVU0 708 aa14.36□□□□□ -0.11
CDC42BPB-202ENST00000558321 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-202ENST00000558321 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 PPP1R11O60927 126 aaPredicted RBP14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 TIMP1P01033 207 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 KIF5BP33176 963 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 PSMC6P62333 389 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 NECTIN1Q15223 517 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 FAM126BQ8IXS8 530 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 DEFB123Q8N688 67 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 TMEM87BQ96K49 555 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 SEZ6LQ9BYH1 1024 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 RIOX1Q9H6W3 641 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 COL20A1Q9P218 1284 aa14.35□□□□□ -0.11
CDC42BPB-202ENST00000558321 PNMA6FA0A0J9YX94 578 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 EIF3JO75822 258 aaKnown RBP14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 NR3C2P08235 984 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 COPS5Q92905 334 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 MAP3K14Q99558 947 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 MYL10Q9BUA6 226 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 MAP3K20Q9NYL2 800 aaKnown RBP14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 TBX21Q9UL17 535 aa14.34□□□□□ -0.11
CDC42BPB-202ENST00000558321 CYTH3O43739 400 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 KPNA6O60684 536 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 CDC45O75419 566 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 DDAH1O94760 285 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 NEFLP07196 543 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 GNAQP50148 359 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 HSD17B4P51659 736 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 CHMP4BP1P59074 171 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 Q7L0L9 218 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 TMEM199Q8N511 208 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 SLC43A3Q8NBI5 491 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 MTG1Q9BT17 334 aaPredicted RBP14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 TRPV6Q9H1D0 765 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 PXMP2Q9NR77 195 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
CDC42BPB-202ENST00000558321 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 OPLAHO14841 1288 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 GH1P01241 217 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CD4P01730 458 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CALM1P0DP23 149 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CALM2P0DP24 149 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CALM3P0DP25 149 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CYP2C18P33260 490 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 EPHB4P54760 987 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 PURAQ00577 322 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 PPIGQ13427 754 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■□□□□ 8.4
CDC42BPB-202ENST00000558321 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 HIPK3Q9H422 1215 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
CDC42BPB-202ENST00000558321 LCTP09848 1927 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 A6NJR5 290 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 ARIH2O95376 493 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 CSF2RAP15509 400 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 LIFRP42702 1097 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
CDC42BPB-202ENST00000558321 LRRC37A2A6NM11 1700 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 B4GALT4O60513 344 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 RXRAP19793 462 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 CCND2P30279 289 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 GHRHRQ02643 423 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 NBPF20Q3BBV1 942 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 NEK1Q96PY6 1258 aa14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
CDC42BPB-202ENST00000558321 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms